RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 CYB5R2Q6BCY4 276 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 SLC30A6Q6NXT4 461 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 VWA1Q6PCB0 445 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 AAGABQ6PD74 315 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 BHLHB9Q6PI77 547 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ANGPTL8Q6UXH0 198 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 TMEM64Q6YI46 380 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ZNF662Q6ZS27 426 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 NUP54Q7Z3B4 507 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ST13P4Q8IZP2 240 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ACOT4Q8N9L9 421 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ZNF610Q8N9Z0 462 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 BBOF1Q8ND07 529 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 OR14L1PQ8NHC6 308 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 TANKQ92844 425 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 RIT1Q92963 219 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 RHBDF1Q96CC6 855 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ZG16BQ96DA0 208 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 DTNBP1Q96EV8 351 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 PDLIM5Q96HC4 596 aaKnown RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ZNF845Q96IR2 970 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 F2RL3Q96RI0 385 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 TNFRSF13CQ96RJ3 184 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 NDNQ99608 321 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 MAPKAP1Q9BPZ7 522 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 PELOQ9BRX2 385 aaKnown RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 TMEM204Q9BSN7 226 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 KLHL4Q9C0H6 718 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 OR2B2Q9GZK3 357 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 WWTR1Q9GZV5 400 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 OPN3Q9H1Y3 402 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 RPF2Q9H7B2 306 aaKnown RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ACTR8Q9H981 624 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 FANCFQ9NPI8 374 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 C20orf96Q9NUD7 363 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 MS4A12Q9NXJ0 267 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ING3Q9NXR8 418 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 EXO1Q9UQ84 846 aaKnown RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 MRPS18CQ9Y3D5 142 aaKnown RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 EPN1Q9Y6I3 576 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 SONP18583 2426 aaKnown RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 TCRBV7S3A2A0A539 114 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 SYCE3A1L190 88 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 SLC22A20A6NK97 555 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 KCNAB3O43448 404 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 OR10H2O60403 315 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 LMX1BO60663 402 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 ICOSLGO75144 302 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 IPO7O95373 1038 aaKnown RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 GPR75O95800 540 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 IGHV4-39P01824 125 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 ABCB1P08183 1280 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 SOD3P08294 240 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 RHOXF2BP0C7M4 288 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 DANCRP0C864 163 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 GAAP10253 952 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 MLNP12872 115 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 ZNF708P17019 499 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 SRD5A1P18405 259 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 HIST1H1TP22492 207 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 SRD5A2P31213 254 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 CCKARP32238 428 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 HNMTP50135 292 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 CLDN18P56856 261 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 EEFSECP57772 596 aaKnown RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 DSCR9P59020 149 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 HERVK_113P63132 956 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 ERVK-8P63133 956 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 VLDLRP98155 873 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 CDKL1Q00532 357 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 LOXL1Q08397 574 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 TBX2Q13207 712 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 SLAMF1Q13291 335 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 SNTA1Q13424 505 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 SQLEQ14534 574 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 HIST2H2ACQ16777 129 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 TMEM249Q2WGJ8 235 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 TMEM35AQ53FP2 167 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 HSP90AA5PQ58FG0 334 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 UBAP2Q5T6F2 1119 aaKnown RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 HIST2H2AA3Q6FI13 130 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 CAVIN1Q6NZI2 390 aaKnown RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 TMEM81Q6P7N7 255 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 DRICH1Q6PGQ1 229 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 SBSNQ6UWP8 590 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 C12orf54Q6X4T0 127 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 ZNF793Q6ZN11 406 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 DGAT2L6Q6ZPD8 337 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 GSTA5Q7RTV2 222 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 GPR180Q86V85 440 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 IFNEQ86WN2 208 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 WDSUB1Q8N9V3 476 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 PIK3C3Q8NEB9 887 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 C17orf47Q8NEP4 570 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 OR10H5Q8NGA6 315 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 DOK4Q8TEW6 326 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 SMAP2Q8WU79 429 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 SLC25A43Q8WUT9 341 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-229ENST00000554672 HES6Q96HZ4 224 aa4.32□□□□□ -1.72
ATXN3-229ENST00000554672 VPS39Q96JC1 886 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms