RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CFIP05156 583 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 AQP2P41181 271 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 DHPSP49366 369 aaPredicted RBP13.2□□□□□ -0.3
VTI1B-204ENST00000554659 SIM1P81133 766 aaPredicted RBP13.2□□□□□ -0.3
VTI1B-204ENST00000554659 TOR1AIP2Q8NFQ8 470 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 ZDHHC1Q8WTX9 485 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 PGAM5Q96HS1 289 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 NELFAQ9H3P2 528 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 MEGF11A6BM72 1044 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 SPDEFO95238 335 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 PRKACBP22694 351 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 SLC5A2P31639 672 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 EVI2BP34910 448 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 PRPS1P60891 318 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 TAP2Q03519 686 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 WDR53Q7Z5U6 358 aaPredicted RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 SLC35F2Q8IXU6 374 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 OR56B2PQ8NGI1 322 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 HOXB13Q92826 284 aaPredicted RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 OR1A2Q9Y585 309 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 MBLAC1A4D2B0 266 aaPredicted RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 PPP1R3DO95685 299 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 MRPS10P82664 201 aaKnown RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 RAB33AQ14088 237 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 FAM69AQ5T7M9 428 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 TTLL10Q6ZVT0 673 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 OR4N5Q8IXE1 308 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 PNPLA1Q8N8W4 532 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 Q8N9G6 341 aaPredicted RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 ELMOD3Q96FG2 381 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 PRRC1Q96M27 445 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 CNIH4Q9P003 139 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 A0A1B0GVG6 124 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 TSPAN15O95858 294 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 TFAP2AP05549 437 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 ALDOCP09972 364 aaKnown RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 NKX3-2P78367 333 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 AKR1C8PQ5T2L2 129 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 HES5Q5TA89 166 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 HACD4Q5VWC8 232 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 PXKQ7Z7A4 578 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 SORCS1Q8WY21 1168 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 LIN37Q96GY3 246 aaPredicted RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 C20orf27Q9GZN8 174 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 PITHD1Q9GZP4 211 aaPredicted RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 TEX10Q9NXF1 929 aaPredicted RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 PPP4R1LQ9P1A2 415 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 SLC7A7Q9UM01 511 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 POLR1CO15160 346 aaPredicted RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 DIRAS3O95661 229 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 ALPLP05186 524 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 FBLP22087 321 aaKnown RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 PLP2Q04941 152 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 ELOAQ14241 798 aaKnown RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 SPCS2Q15005 226 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 AGAP6Q5VW22 663 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 TRIM46Q7Z4K8 759 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 SPRED1Q7Z699 444 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 CLEC14AQ86T13 490 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 TOPAZ1Q8N9V7 1692 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 CHST14Q8NCH0 376 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 MUL1Q969V5 352 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 PDLIM5Q96HC4 596 aaKnown RBP13.19□□□□□ -0.3
VTI1B-204ENST00000554659 SHDQ96IW2 340 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 AGAP4Q96P64 663 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 GABRQQ9UN88 632 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 ACTL7AQ9Y615 435 aa13.19□□□□□ -0.3
VTI1B-204ENST00000554659 PEX12O00623 359 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 GOSR2O14653 212 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 CRYZL1O95825 349 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 TFP02787 698 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 CDRT4Q8N9R6 151 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 ACBD4Q8NC06 268 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 GTF2H4Q92759 462 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 DPH1Q9BZG8 443 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 FBRSQ9HAH7 460 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 LRFN1Q9P244 771 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 REV1Q9UBZ9 1251 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 ICKQ9UPZ9 632 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 CCDC163A0A0D9SF12 145 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 ZNF705FA8MVS1 300 aaPredicted RBP13.18□□□□□ -0.3
VTI1B-204ENST00000554659 NUPL2O15504 423 aaKnown RBP13.18□□□□□ -0.3
VTI1B-204ENST00000554659 ZNF705DP0CH99 300 aaPredicted RBP13.18□□□□□ -0.3
VTI1B-204ENST00000554659 ZNF705BP0CI00 300 aaPredicted RBP13.18□□□□□ -0.3
VTI1B-204ENST00000554659 PRSS3P35030 304 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 WDR5P61964 334 aaKnown RBP13.18□□□□□ -0.3
VTI1B-204ENST00000554659 MAP4K2Q12851 820 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 RHOXF1Q8NHV9 184 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 SERINC2Q96SA4 455 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 SLC6A16Q9GZN6 736 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 ZNF175Q9Y473 711 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 PPP6CO00743 305 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 HRGP04196 525 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 C5AR1P21730 350 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 ERVK-25P63136 954 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 ARL6IP1Q15041 203 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 RAB30Q15771 203 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 GPR26Q8NDV2 337 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 SULT4A1Q9BR01 284 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 IL20RAQ9UHF4 553 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms