RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ZCCHC18P0CG32 403 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 RAP2AP10114 183 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 PPIBP23284 216 aaKnown RBP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 CDKN2CP42773 168 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 MEOX1P50221 254 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 RNF4P78317 190 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 PDK3Q15120 406 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 FAM98BQ52LJ0 330 aaKnown RBP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 CPTPQ5TA50 214 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 MTFR2Q6P444 385 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 TMEM154Q6P9G4 183 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 IL20RBQ6UXL0 311 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 PAGE2Q7Z2X7 111 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 MDGA2Q7Z553 956 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 R3HCC1LQ7Z5L2 792 aaKnown RBP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 SERPINA11Q86U17 422 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 SULF2Q8IWU5 870 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 GPALPP1Q8IXQ4 340 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF321PQ8N8H1 164 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 VPS37AQ8NEZ2 397 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 OR8K3Q8NH51 312 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 GFM2Q969S9 779 aaKnown RBP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 RELTQ969Z4 430 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 MTERF3Q96E29 417 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 SENP5Q96HI0 755 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 REXO5Q96IC2 774 aaKnown RBP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 ART5Q96L15 291 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 PELOQ9BRX2 385 aaKnown RBP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 SPATA9Q9BWV2 254 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 OSBPL11Q9BXB4 747 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF717Q9BY31 904 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 UGT2B28Q9BY64 529 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 BHLHE41Q9C0J9 482 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 PIF1Q9H611 641 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 ASB4Q9Y574 426 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 AP4B1Q9Y6B7 739 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 FREM3P0C091 2139 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 NBPF19A0A087WUL8 3843 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 PKDREJQ9NTG1 2253 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 GNG14A0A1W2PPG7 69 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 A0A1W2PR48 441 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 WASHC1A8K0Z3 465 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 TMPRSS11DO60235 418 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 WISP2O76076 250 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 OR6B1O95007 311 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 GPR75O95800 540 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 KLK1P06870 262 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 UBTFL6P0CB48 400 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-214ENST00000554604 LAMP1P11279 417 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 ABOP16442 354 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 GPX2P18283 190 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 RFC3P40938 356 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 SOX3P41225 446 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 CA7P43166 264 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 GPR85P60893 370 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 IGLV3-21P80748 117 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-214ENST00000554604 CHRNB3Q05901 458 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 PDE7AQ13946 482 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 MRM1Q6IN84 353 aaKnown RBP11.47□□□□□ -0.57
SHMT2-214ENST00000554604 ERICH5Q6P6B1 374 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 UGT2A3Q6UWM9 527 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 ZBTB49Q6ZSB9 765 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 IKBIPQ70UQ0 350 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 COMMD6Q7Z4G1 85 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 ANKRD46Q86W74 232 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 ST13P4Q8IZP2 240 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-214ENST00000554604 GHDCQ8N2G8 530 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 GALNT4Q8N4A0 578 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 PSD4Q8NDX1 1056 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 FAM110BQ8TC76 370 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 DOK4Q8TEW6 326 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF721Q8TF20 911 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 PANX1Q96RD7 426 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 RASL10BQ96S79 203 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 CIB1Q99828 191 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 CNPPD1Q9BV87 410 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 REEP4Q9H6H4 257 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 MAGIXQ9H6Y5 334 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 CORO2BQ9UQ03 480 aa11.47□□□□□ -0.57
SHMT2-214ENST00000554604 WBP11Q9Y2W2 641 aaKnown RBP11.47□□□□□ -0.57
SHMT2-214ENST00000554604 TMEM200CA6NKL6 621 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 CLIC1O00299 241 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 RNASET2O00584 256 aaKnown RBP11.46□□□□□ -0.57
SHMT2-214ENST00000554604 GUCY1B2O75343 617 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 PRSS23O95084 383 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 AIFM1O95831 613 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 GSNP06396 782 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 COL8A1P27658 744 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 GSTM5P46439 218 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 CHN2P52757 468 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 TXNL4AP83876 142 aaKnown RBP11.46□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF267Q14586 743 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-214ENST00000554604 RNFT1Q5M7Z0 435 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 CCNYL2Q5T2Q4 361 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 OR52E8Q6IFG1 317 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 FAM71E1Q6IPT2 247 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 OPN5Q6U736 354 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 EPHX4Q8IUS5 362 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 SIAH3Q8IW03 269 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms