RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 LIN7CQ9NUP9 197 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GMDSO60547 372 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GOSR1O95249 250 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CPMP14384 443 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 AKR1C1Q04828 323 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 IKZF1Q13422 519 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 OR51I1Q9H343 314 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM216Q9P0N5 145 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 B4GALT6Q9UBX8 382 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PCDHB14Q9Y5E9 798 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ARHGEF5Q12774 1597 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SERPINA6P08185 405 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 IGFBP6P24592 240 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 VEGFCP49767 419 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF280AP59817 542 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SNRPFP62306 86 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GBX1Q14549 363 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PIGGQ5H8A4 983 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GLYATQ6IB77 296 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PAMR1Q6UXH9 720 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 MARVELD2Q8N4S9 558 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 LRTOMTQ8WZ04 291 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 NAT9Q9BTE0 207 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GPRC5BQ9NZH0 403 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ZMAT5Q9UDW3 170 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PRDM15P57071 1507 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 BHLHE40O14503 412 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 DRD2P14416 443 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PIK3CBP42338 1070 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CRISP1P54107 249 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PRKAA2P54646 552 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RHOBP62745 196 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SPOCK1Q08629 439 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 USP50Q70EL3 339 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 DCXRQ7Z4W1 244 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 APCDD1Q8J025 514 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 C11orf44Q8N8P7 122 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 KIAA0895Q8NCT3 520 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 NUDT8Q8WV74 236 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TIGARQ9NQ88 270 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 XPNPEP1Q9NQW7 623 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RBPJLQ9UBG7 517 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF320A2RRD8 509 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 H7C2G1 150 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 UGDHO60701 494 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PPP1R3DO95685 299 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 XKP51811 444 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ATP6AP1Q15904 470 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SHEQ5VZ18 495 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM107Q6UX40 140 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 AADATQ8N5Z0 425 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 OR2AP1Q8NGE2 309 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 OR51G2Q8NGK0 314 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 OR8B4Q96RC9 309 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 KPTNQ9Y664 436 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ALKQ9UM73 1620 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 IGHV3-15A0A0B4J1V0 119 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GLTPD2A6NH11 291 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CREBL2O60519 120 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PIGRP01833 764 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 HOXA11P31270 313 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SRSF9Q13242 221 aaKnown RBP eCLIP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 FGFBP1Q14512 234 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RHEBQ15382 184 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CRB2Q5IJ48 1285 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 AADACL3Q5VUY0 350 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF705AQ6ZN79 300 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CYP4V2Q6ZWL3 525 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TICAM1Q8IUC6 712 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF160Q9HCG1 818 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ACOXLQ9NUZ1 547 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SLC7A11Q9UPY5 501 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SCN5AQ14524 2016 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CROCC2H7BZ55 1655 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 LTN1O94822 1766 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ABCA6Q8N139 1617 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 MED19A0JLT2 244 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SLC9B1P1A6NJY1 282 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 C12orf71A8MTZ7 269 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CLDN25C9JDP6 229 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RAB33AQ14088 237 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 KLHL22Q53GT1 634 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RPS26P11Q5JNZ5 115 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CIB1Q99828 191 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 BOCQ9BWV1 1114 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 AGO3Q9H9G7 860 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 NUDT15Q9NV35 164 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GMPR2Q9P2T1 348 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 H0YAE9 185 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ACOT7O00154 380 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RD3LP0DJH9 198 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 NID1P14543 1247 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ACTR3P61158 418 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF750Q32MQ0 723 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TRMT10BQ6PF06 316 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF720Q7Z2F6 126 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 AMZ2Q86W34 360 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ROBO4Q8WZ75 1007 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 C7orf26Q96N11 449 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms