RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 MBD3L4A6NDZ8 208 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 MBD3L3A6NE82 208 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 MBD3L5A6NJ08 208 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 SYT5O00445 386 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 DVL2O14641 736 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 EMC8O43402 210 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 AKAP10O43572 662 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 FADS1O60427 444 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 SKAP2O75563 359 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 SNUPNO95149 360 aaKnown RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 KCNH1O95259 989 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 IL33O95760 270 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 CHMP24386 653 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 DPP4P27487 766 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 GABRA3P34903 492 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 EVI2BP34910 448 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 HPCAL1P37235 193 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 MAP3K8P41279 467 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 RPL14P50914 215 aaKnown RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 GAS1P54826 345 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 GFRA1P56159 465 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 DSCR4P56555 118 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 TLE4Q04727 773 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 HSPB3Q12988 150 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 MAD2L1Q13257 205 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 BCL2A1Q16548 175 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 ATP6AP1LQ52LC2 224 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 ZNF385BQ569K4 471 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 XKR7Q5GH72 579 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 ANKRD26P1Q6NSI1 321 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 AAGABQ6PD74 315 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 ZCCHC12Q6PEW1 402 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 SEM1Q6ZVN7 128 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 ZNF551Q7Z340 670 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 WDR53Q7Z5U6 358 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 IFNEQ86WN2 208 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 ZNF781Q8N8C0 355 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 CDRT4Q8N9R6 151 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 NUP43Q8NFH3 380 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 TNIP2Q8NFZ5 429 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 OR4K17Q8NGC6 315 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 MBD3L2Q8NHZ7 208 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 ZNF75CPQ92670 426 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 HOXB13Q92826 284 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 CIDECQ96AQ7 238 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 UCN2Q96RP3 112 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 TRIB1Q96RU8 372 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 PRPF18Q99633 342 aaKnown RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 PTGES2Q9H7Z7 377 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 MCCC2Q9HCC0 563 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 THAP1Q9NVV9 213 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 FAM120CQ9NX05 1096 aaKnown RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 TAS2R10Q9NYW0 307 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 PPP4R1LQ9P1A2 415 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 KCNN3Q9UGI6 736 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 ATP6V1HQ9UI12 483 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 FOXD3Q9UJU5 478 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.93□□□□□ -1.14
ACTN1-213ENST00000554508 RAP2CQ9Y3L5 183 aa7.93□□□□□ -1.14
ACTN1-213ENST00000554508 DCHS2Q6V1P9 2916 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 LINC01387J3KSC0 135 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 KLF11O14901 512 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 SCAMP2O15127 329 aaKnown RBP7.92□□□□□ -1.14
ACTN1-213ENST00000554508 ZIC3O60481 467 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 PEX11AO75192 247 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 SNNO75324 88 aaPredicted RBP7.92□□□□□ -1.14
ACTN1-213ENST00000554508 SOX30O94993 753 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 NKX2-2O95096 273 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 IL18BPO95998 194 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 KITP10721 976 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 PEPDP12955 493 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 LCN1P31025 176 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 PRIM2P49643 509 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 ASCL1P50553 236 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 PRR5P85299 388 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 C17orf67Q0P5P2 114 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 GANABQ14697 944 aaKnown RBP7.92□□□□□ -1.14
ACTN1-213ENST00000554508 PDCD2Q16342 344 aaPredicted RBP7.92□□□□□ -1.14
ACTN1-213ENST00000554508 SMU1Q2TAY7 513 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 FBXL19-AS1Q494R0 122 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 GLYR1Q49A26 553 aaPredicted RBP7.92□□□□□ -1.14
ACTN1-213ENST00000554508 C6orf136Q5SQH8 315 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 DCST1Q5T197 706 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 OR5M10Q6IEU7 315 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 ARSKQ6UWY0 536 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 KIRREL3Q8IZU9 778 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 FADS6Q8N9I5 356 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 GOT1L1Q8NHS2 421 aaPredicted RBP7.92□□□□□ -1.14
ACTN1-213ENST00000554508 CLHC1Q8NHS4 586 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 GPR151Q8TDV0 419 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 CKAP2Q8WWK9 683 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 PPP1R36Q96LQ0 422 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 MAGEB18Q96M61 343 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 ZFP3Q96NJ6 502 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 MS4A4EQ96PG1 132 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 SORT1Q99523 831 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 TM9SF2Q99805 663 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 ZNF559Q9BR84 538 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 DSN1Q9H410 356 aa7.92□□□□□ -1.14
ACTN1-213ENST00000554508 EQTNQ9NQ60 294 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms