RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SDC1P18827 310 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 IDSP22304 550 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 SOX6P35712 828 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 ALDH3B2P48448 385 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 PLOD1Q02809 727 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-210ENST00000553455 CHI3L2Q15782 390 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 EIPR1Q53HC9 387 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 FAM43BQ6ZT52 329 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-210ENST00000553455 CYS1Q717R9 158 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 HSD11B1LQ7Z5J1 315 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 UNC5CLQ8IV45 518 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 NAXDQ8IW45 347 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 IPMKQ8NFU5 416 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 OR2L2Q8NH16 312 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 OSTF1Q92882 214 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 TADA1Q96BN2 335 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 ZBED6CLQ96FA7 236 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-210ENST00000553455 TPPP3Q9BW30 176 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 TM2D1Q9BX74 207 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 HCAR1Q9BXC0 346 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 UBXN6Q9BZV1 441 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 DHX33Q9H6R0 707 aaKnown RBP3.98□□□□□ -1.77
SYNE2-210ENST00000553455 TIGARQ9NQ88 270 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 IMPAD1Q9NX62 359 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 LCMT2O60294 686 aaKnown RBP3.97□□□□□ -1.77
SYNE2-210ENST00000553455 NEBLO76041 1014 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 MFN2O95140 757 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 ANP32DO95626 131 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 OPN1LWP04000 364 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 UMPSP11172 480 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 LAMP1P11279 417 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 PAX7P23759 505 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 EMDP50402 254 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 IST1P53990 364 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 IL18R1Q13478 541 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 RUNX3Q13761 415 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 SLC10A1Q14973 349 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 SLC22A6Q4U2R8 563 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 CES3Q6UWW8 571 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 ANKRD37Q7Z713 158 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-210ENST00000553455 GMCL1P1Q8NEA9 526 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 C18orf25Q96B23 403 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-210ENST00000553455 FOXN4Q96NZ1 517 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 FEM1AQ9BSK4 669 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 GSDMCQ9BYG8 508 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 RAB33BQ9H082 229 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 RHOJQ9H4E5 214 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 RIBC2Q9H4K1 309 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 POLD4Q9HCU8 107 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 PALMDQ9NP74 551 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.97□□□□□ -1.77
SYNE2-210ENST00000553455 ELOVL2Q9NXB9 296 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 CYTH4Q9UIA0 394 aa3.97□□□□□ -1.77
SYNE2-210ENST00000553455 FAM74A7A6NL05 159 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 CLDN5O00501 218 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 SLC17A2O00624 439 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 STX11O75558 287 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 RHBDL1O75783 438 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 IDH1O75874 414 aaKnown RBP3.96□□□□□ -1.78
SYNE2-210ENST00000553455 UFL1O94874 794 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 GJB5O95377 273 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 PRAMEF12O95522 483 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 CSF2P04141 144 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 ADSSP30520 456 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 KIF5BP33176 963 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 ERVPABLB-1P60509 514 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 LMO4P61968 165 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 CNTN2Q02246 1040 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 SNTB2Q13425 540 aaKnown RBP3.96□□□□□ -1.78
SYNE2-210ENST00000553455 DPYSL3Q14195 570 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 HIGD2BQ4VC39 106 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 FAM74A3Q4VXF1 159 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 CELF3Q5SZQ8 465 aaKnown RBP3.96□□□□□ -1.78
SYNE2-210ENST00000553455 ZNF57Q68EA5 555 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-210ENST00000553455 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-210ENST00000553455 GCNT7Q6ZNI0 430 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 LANCL3Q6ZV70 420 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 ERICH1Q86X53 443 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 M1APQ8TC57 530 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 THRSPQ92748 146 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 AKR1E2Q96JD6 320 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 APOL2Q9BQE5 337 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 POLR3FQ9H1D9 316 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-210ENST00000553455 MEAF6Q9HAF1 191 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 EXOSC3Q9NQT5 275 aaKnown RBP3.96□□□□□ -1.78
SYNE2-210ENST00000553455 SLC2A6Q9UGQ3 507 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 ANAPC7Q9UJX3 599 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 CARMIL1Q5VZK9 1371 aa3.96□□□□□ -1.78
SYNE2-210ENST00000553455 PPIAL4CA0A0B4J2A2 164 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 A0A1W2PQ72 361 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 G3V3Y1 287 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 XPO1O14980 1071 aaKnown RBP3.95□□□□□ -1.78
SYNE2-210ENST00000553455 GPRIN2O60269 458 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 TSC22D2O75157 780 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 SLC2A10O95528 541 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 PPIAL4GP0DN37 164 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 BCKDHAP12694 445 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 H2AFXP16104 143 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-210ENST00000553455 HNRNPA2B1P22626 353 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms