RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 C6orf89Q6UWU4 347 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 FRRS1Q6ZNA5 592 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 TRPM8Q7Z2W7 1104 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 ANKFN1Q8N957 763 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 PCYOX1LQ8NBM8 494 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 OR8J3Q8NGG0 315 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 OR4C3Q8NH37 302 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 XAGE5Q8WWM1 108 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 TMEM125Q96AQ2 219 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 RSPO3Q9BXY4 272 aaPredicted RBP13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 SLC38A1Q9H2H9 487 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 CMTM6Q9NX76 183 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 TAGLN3Q9UI15 199 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 DSPPQ9NZW4 1301 aa13.61□□□□□ -0.23
MTHFD1-204ENST00000553405 CENPVL1A0A0U1RR11 272 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 C17orf51A8MQB3 221 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 AIM2O14862 343 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 KIAA0513O60268 411 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 AGR2O95994 175 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 AK1P00568 194 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 LCN1P31025 176 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 CPOXP36551 454 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 CPA2P48052 419 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 DSTNP60981 165 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 PLAURQ03405 335 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 EFR3AQ14156 821 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 GRAMD1BQ3KR37 738 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 MMEL1Q495T6 779 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 SOWAHCQ53LP3 525 aaPredicted RBP13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 SLC22A10Q63ZE4 541 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 TYW3Q6IPR3 259 aaKnown RBP13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 GALNTL5Q7Z4T8 443 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 SULF2Q8IWU5 870 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 SLC15A3Q8IY34 581 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 POGLUT1Q8NBL1 392 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 FAM13CQ8NE31 585 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 OR5M3Q8NGP4 307 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 SLC38A5Q8WUX1 472 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 MAL2Q969L2 176 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 TRNT1Q96Q11 434 aaKnown RBP13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 TAAR6Q96RI8 345 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 ANGPTL4Q9BY76 406 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 RAD21L1Q9H4I0 556 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 EFCAB1Q9HAE3 211 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 A4GALTQ9NPC4 353 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 TIMMDC1Q9NPL8 285 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 CNIH4Q9P003 139 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 PCDHGB3Q9Y5G1 929 aa13.6□□□□□ -0.23
MTHFD1-204ENST00000553405 LRRC3CA6NJW4 275 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 TP53I11O14683 189 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 TRIM3O75382 744 aaPredicted RBP13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 C1QL1O75973 258 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 GLSO94925 669 aaPredicted RBP13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 UTS2O95399 124 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 ARAFP10398 606 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 CD46P15529 392 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 TBXA2RP21731 343 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 RPS4Y1P22090 263 aaKnown RBP13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 EVI2BP34910 448 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 CRATP43155 626 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 CBX1P83916 185 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 KLRB1Q12918 225 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 MAPK14Q16539 360 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 COLEC12Q5KU26 742 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 RNFT1Q5M7Z0 435 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 ANGPTL8Q6UXH0 198 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 ZZZ3Q8IYH5 903 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 ZG16BQ96DA0 208 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 ZNF583Q96ND8 569 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 BARD1Q99728 777 aaKnown RBP13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 G6PC3Q9BUM1 346 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 TMEM38AQ9H6F2 299 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 BCL2L10Q9HD36 194 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 KLHL1Q9NR64 748 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 EXD2Q9NVH0 621 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 GID8Q9NWU2 228 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 GMPR2Q9P2T1 348 aaKnown RBP13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 ABCD2Q9UBJ2 740 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 LIPT1Q9Y234 373 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 NTNG1Q9Y2I2 539 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 NINQ8N4C6 2090 aa13.59□□□□□ -0.23
MTHFD1-204ENST00000553405 NPIPA5A0A0B4J1W7 369 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 PRAMEF25A6NGN4 478 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 CCT8L1PA6NM43 557 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 ALG1L2C9J202 215 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 NPIPA7E9PJI5 369 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 G3V3Y1 287 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 NME4O00746 187 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 PEX1O43933 1283 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 GCM2O75603 506 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 UBOX5O94941 541 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 H6PDO95479 791 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 OXSR1O95747 527 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 NPIPA8P0DM63 369 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 CNR1P21554 472 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 IL12BP29460 328 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 NUDT2P50583 147 aa13.58□□□□□ -0.24
MTHFD1-204ENST00000553405 PSMD4P55036 377 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms