RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 LHX2P50458 406 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 DSCR4P56555 118 aaPredicted RBP8.97□□□□□ -0.97
ACTN1-208ENST00000553370 RPS3AP61247 264 aaKnown RBP8.97□□□□□ -0.97
ACTN1-208ENST00000553370 PPP2R2BQ00005 443 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 PLAURQ03405 335 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 TNP2Q05952 138 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 BTKQ06187 659 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 FGFBP1Q14512 234 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 GANABQ14697 944 aaKnown RBP8.97□□□□□ -0.97
ACTN1-208ENST00000553370 SGCBQ16585 318 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 EXOC3L2Q2M3D2 409 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 ZNF628Q5EBL2 1059 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 LGSNQ5TDP6 509 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 SIMC1Q8NDZ2 872 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 UHMK1Q8TAS1 419 aaKnown RBP8.97□□□□□ -0.97
ACTN1-208ENST00000553370 METTL6Q8TCB7 284 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 ZNF675Q8TD23 568 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 ZNF483Q8TF39 744 aaPredicted RBP8.97□□□□□ -0.97
ACTN1-208ENST00000553370 ERP27Q96DN0 273 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 PERPQ96FX8 193 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 PGM2Q96G03 612 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 SLC35A4Q96G79 324 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 FMO2Q99518 471 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 PINK1Q9BXM7 581 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 TBL1XR1Q9BZK7 514 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 OPN3Q9H1Y3 402 aaPredicted RBP8.97□□□□□ -0.97
ACTN1-208ENST00000553370 CDC42EP4Q9H3Q1 356 aaKnown RBP8.97□□□□□ -0.97
ACTN1-208ENST00000553370 HEATR1Q9H583 2144 aaKnown RBP8.97□□□□□ -0.97
ACTN1-208ENST00000553370 PIF1Q9H611 641 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 ANKRA2Q9H9E1 313 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 ZBTB26Q9HCK0 441 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 FANCFQ9NPI8 374 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 STOML1Q9UBI4 398 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 CES1P1Q9UKY3 287 aa8.97□□□□□ -0.97
ACTN1-208ENST00000553370 GPR55Q9Y2T6 319 aaPredicted RBP8.97□□□□□ -0.97
ACTN1-208ENST00000553370 ATRQ13535 2644 aa8.96□□□□□ -0.97
ACTN1-208ENST00000553370 RAI1Q7Z5J4 1906 aaPredicted RBP8.96□□□□□ -0.97
ACTN1-208ENST00000553370 A0A087WUV0 522 aaPredicted RBP8.96□□□□□ -0.98
ACTN1-208ENST00000553370 H7C1Q1 480 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 TGM6O95932 706 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 CRHP06850 196 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 HEXAP06865 529 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 PCSK6P29122 969 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 SMCPP49901 116 aaPredicted RBP8.96□□□□□ -0.98
ACTN1-208ENST00000553370 NCBP2P52298 156 aaKnown RBP eCLIP8.96□□□□□ -0.98
ACTN1-208ENST00000553370 PNLIPRP2P54317 469 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 PSMD4P55036 377 aaKnown RBP8.96□□□□□ -0.98
ACTN1-208ENST00000553370 GFRA1P56159 465 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 CTBP2P56545 445 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 CLDN18P56856 261 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 CLCQ05315 142 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 DUSP2Q05923 314 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 MGAT2Q10469 447 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 DECR1Q16698 335 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 TCHHL1Q5QJ38 904 aaPredicted RBP8.96□□□□□ -0.98
ACTN1-208ENST00000553370 VWA1Q6PCB0 445 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 SZRD1Q7Z422 152 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 YTHDF3Q7Z739 585 aaKnown RBP8.96□□□□□ -0.98
ACTN1-208ENST00000553370 GFM2Q969S9 779 aaKnown RBP8.96□□□□□ -0.98
ACTN1-208ENST00000553370 EAF1Q96JC9 268 aaPredicted RBP8.96□□□□□ -0.98
ACTN1-208ENST00000553370 Q96MF0 132 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 BDH2Q9BUT1 245 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 KLHL4Q9C0H6 718 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 DSN1Q9H410 356 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 Q9N2J8 555 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 SLC35C2Q9NQQ7 365 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 DDX18Q9NVP1 670 aaKnown RBP8.96□□□□□ -0.98
ACTN1-208ENST00000553370 HEY2Q9UBP5 337 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 ZNF639Q9UID6 485 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 PROCRQ9UNN8 238 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 EMC9Q9Y3B6 208 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 COL6A5A8TX70 2615 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 CADP27708 2225 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 ABCA1O95477 2261 aa8.96□□□□□ -0.98
ACTN1-208ENST00000553370 A8MXE2 369 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 C16orf97H3BN30 126 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 CTIFO43310 598 aaKnown RBP8.95□□□□□ -0.98
ACTN1-208ENST00000553370 TSPAN2O60636 221 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 NME6O75414 186 aaPredicted RBP8.95□□□□□ -0.98
ACTN1-208ENST00000553370 URI1O94763 535 aaPredicted RBP8.95□□□□□ -0.98
ACTN1-208ENST00000553370 JUNP05412 331 aaKnown RBP8.95□□□□□ -0.98
ACTN1-208ENST00000553370 THBS1P07996 1170 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 ANXA4P09525 319 aaPredicted RBP8.95□□□□□ -0.98
ACTN1-208ENST00000553370 HOXC12P31275 282 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 TIA1P31483 386 aaKnown RBP eCLIP8.95□□□□□ -0.98
ACTN1-208ENST00000553370 MC3RP41968 323 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 ETF1P62495 437 aaKnown RBP8.95□□□□□ -0.98
ACTN1-208ENST00000553370 FAM27E3Q08E93 113 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 ZNF763Q0D2J5 394 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 PON3Q15166 354 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 TMEM107Q6UX40 140 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 NPSR1Q6W5P4 371 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 C20orf204Q6ZNR8 217 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 ZNF550Q7Z398 422 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 C17orf53Q8N3J3 647 aaPredicted RBP8.95□□□□□ -0.98
ACTN1-208ENST00000553370 OR5M1Q8NGP8 315 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 C16orf78Q8WTQ4 265 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 CTHRC1Q96CG8 243 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 VSTM2LQ96N03 204 aa8.95□□□□□ -0.98
ACTN1-208ENST00000553370 ZNF382Q96SR6 550 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms