RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 PRRC1Q96M27 445 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 NDC1Q9BTX1 674 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 RHBGQ9H310 441 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 CHST2Q9Y4C5 530 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 FOXE1O00358 373 aaPredicted RBP10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 HMGN1P05114 100 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 F8A1P23610 371 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 PPM1FP49593 454 aaPredicted RBP10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 AGFG1P52594 562 aaKnown RBP10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 OC90Q02509 493 aaPredicted RBP10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 NDUFAF5Q5TEU4 345 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 RPTNQ6XPR3 784 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 LINC00471Q8N535 108 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 ACOT12Q8WYK0 555 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 TM4SF18Q96CE8 201 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 HHIPQ96QV1 700 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 DPH7Q9BTV6 452 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 MGAT4CQ9UBM8 478 aa10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 AK6Q9Y3D8 172 aaKnown RBP10.88□□□□□ -0.67
PPFIA2-227ENST00000552948 FXYD6-FXYD2A0A087WZ82 144 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 A0A1W2PRQ8 180 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 SHISA3A0PJX4 238 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 FAM86C2PA6NEL3 165 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 BLVRAP53004 296 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 EPHA5P54756 1037 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 RTL4Q6ZR62 310 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 NKAIN4Q8IVV8 208 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 GCDHQ92947 438 aaPredicted RBP10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 ZNF689Q96CS4 500 aaPredicted RBP10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 CAMK1GQ96NX5 476 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 MED18Q9BUE0 208 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 DPH1Q9BZG8 443 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 RNF32Q9H0A6 362 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 FXYD6Q9H0Q3 95 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 BABAM2Q9NXR7 383 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 PFDN2Q9UHV9 154 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 PLXNB2O15031 1838 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 IGLV3-16A0A075B6K0 115 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 ARRDC5A6NEK1 342 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 AGAP14A8MT82 685 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 LRRN3E7EW58 273 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 SMAD9O15198 467 aaKnown RBP10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 CCL16O15467 120 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 RNF13O43567 381 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 PEPDP12955 493 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 PRKACAP17612 351 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 DGCR2P98153 550 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 TAGLNQ01995 201 aaKnown RBP10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 PYHIN1Q6K0P9 492 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 ARSKQ6UWY0 536 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 C17orf99Q6UX52 265 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 ZNF782Q6ZMW2 699 aaPredicted RBP10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 OR11H7Q8NGC8 314 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 OR8D4Q8NGM9 314 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 OR2A12Q8NGT7 310 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 OR5W2Q8NH69 310 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 FERD3LQ96RJ6 166 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 LYSMD1Q96S90 227 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 LRRN3Q9H3W5 708 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 A4GALTQ9NPC4 353 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 ZDHHC4Q9NPG8 344 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 KRCC1Q9NPI7 259 aaPredicted RBP10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 KCND3Q9UK17 655 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 FBXO9Q9UK97 447 aaPredicted RBP10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 RABL2BQ9UNT1 228 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 FLVCR2Q9UPI3 526 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 TEX51A0A1B0GUA7 166 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 CDK2AP1O14519 115 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 NDUFS4O43181 175 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 TYRP14679 529 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 M6PRP20645 277 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 NUP62P37198 522 aaPredicted RBP10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 SOX9P48436 509 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 CCR8P51685 355 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 LGALS3BPQ08380 585 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 SFXN4Q6P4A7 337 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 RAB42Q8N4Z0 105 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 OR5M3Q8NGP4 307 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 DDOQ99489 341 aa10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 CDV3Q9UKY7 258 aaKnown RBP10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 ABT1Q9ULW3 272 aaKnown RBP10.87□□□□□ -0.67
PPFIA2-227ENST00000552948 A0A1W2PPL8 197 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 SLC5A10A0PJK1 596 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 NPIPB8E9PQR5 432 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 PLATP00750 562 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 MT-ND5P03915 603 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 NDUFV2P19404 249 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 RAB3BP20337 219 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 AHCYP23526 432 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 CLDN2P57739 230 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 SLC9A5Q14940 896 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 LY6G5CQ5SRR4 150 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 ALKAL2Q6UX46 152 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 MTSS1LQ765P7 747 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 FBXL6Q8N531 539 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 OR11H4Q8NGC9 324 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 OR13C5Q8NGS8 318 aa10.86□□□□□ -0.67
PPFIA2-227ENST00000552948 ZG16BQ96DA0 208 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms