RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 NPIPA5E9PKD4 350 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 ACOX3O15254 700 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 SCN2BO60939 215 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 REM1O75628 298 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 OR2J2O76002 312 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 SOX30O94993 753 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 ZCCHC18P0CG32 403 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 CD99P14209 185 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 GABRA3P34903 492 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 ZFP36L2P47974 494 aaKnown RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 CASP9P55211 416 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 RPS26P62854 115 aaKnown RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 POU6F2P78424 691 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 TXNL4AP83876 142 aaKnown RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 ALDH6A1Q02252 535 aaKnown RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 CAPRIN1Q14444 709 aaKnown RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 DECR1Q16698 335 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 CYP51A1Q16850 503 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 GTDC1Q4AE62 458 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 PAGE3Q5JUK9 113 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 WDR53Q7Z5U6 358 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 RNF130Q86XS8 419 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 DOLPP1Q86YN1 238 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 TREML1Q86YW5 311 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 CHERPQ8IWX8 916 aaKnown RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 PRR22Q8IZ63 422 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 LGI4Q8N135 537 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 BEST3Q8N1M1 668 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 ZNF615Q8N8J6 731 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 MDS2Q8NDY4 140 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 FAM13CQ8NE31 585 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 GOT1L1Q8NHS2 421 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 PSMA8Q8TAA3 256 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 PHF10Q8WUB8 498 aaKnown RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 TMEM125Q96AQ2 219 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 ROPN1LQ96C74 230 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 SDCCAG3Q96C92 435 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 NEURL3Q96EH8 262 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 HSPBAP1Q96EW2 488 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 OTUB1Q96FW1 271 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 RMND5BQ96G75 393 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 AURKBQ96GD4 344 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 DMRTA2Q96SC8 542 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 CGREF1Q99674 301 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 TMUB1Q9BVT8 246 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 OR51I1Q9H343 314 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 LIN28AQ9H9Z2 209 aaKnown RBP10.46□□□□□ -0.73
TMEM116-218ENST00000552839 KLHL1Q9NR64 748 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 MYOTQ9UBF9 498 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 ZNF639Q9UID6 485 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 NPIPA1Q9UND3 350 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 PCDHB14Q9Y5E9 798 aa10.46□□□□□ -0.73
TMEM116-218ENST00000552839 NF1P21359 2839 aa10.46□□□□□ -0.74
TMEM116-218ENST00000552839 E9PLN8 166 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 CLIC1O00299 241 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 ADAM10O14672 748 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 TP53I11O14683 189 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 ASNA1O43681 348 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 PRKNO60260 465 aaPredicted RBP10.45□□□□□ -0.74
TMEM116-218ENST00000552839 AK1P00568 194 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 NPPAP01160 153 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 ABOP16442 354 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 S1PR1P21453 382 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 CALB2P22676 271 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 PPICP45877 212 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 CYB561P49447 251 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 EMDP50402 254 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 CORO7P57737 925 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 MLF1P58340 268 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 DSTNP60981 165 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 HSF1Q00613 529 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 TUBA3CQ13748 450 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 GNA13Q14344 377 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 KRT72Q14CN4 511 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 GPAT3Q53EU6 434 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.45□□□□□ -0.74
TMEM116-218ENST00000552839 SAXO2Q658L1 398 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 SPINK14Q6IE38 97 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 H3F3CQ6NXT2 135 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 CDC73Q6P1J9 531 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 TUBA3EQ6PEY2 450 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 C16orf89Q6UX73 402 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 SIAH3Q8IW03 269 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 DND1Q8IYX4 353 aaKnown RBP10.45□□□□□ -0.74
TMEM116-218ENST00000552839 CYP4Z2PQ8N1L4 340 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 DPP10Q8N608 796 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 SLC15A4Q8N697 577 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 FITM2Q8N6M3 262 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 C17orf47Q8NEP4 570 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 OR52N2Q8NGI0 321 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 CA5BP1Q8WTZ4 195 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 XAGE5Q8WWM1 108 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 CDS1Q92903 461 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 TP53INP1Q96A56 240 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 NSL1Q96IY1 281 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 VSTM2LQ96N03 204 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 FRMD6Q96NE9 622 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 BTBD9Q96Q07 612 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 OR7D2Q96RA2 312 aa10.45□□□□□ -0.74
TMEM116-218ENST00000552839 RASL10BQ96S79 203 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms