RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CYP27C1Q4G0S4 372 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 SH2D4BQ5SQS7 431 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 LETMD1Q6P1Q0 360 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 STAC2Q6ZMT1 411 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 STK32CQ86UX6 486 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 PLD6Q8N2A8 252 aaKnown RBP12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 C1GALT1C1Q96EU7 318 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 TRMT61AQ96FX7 289 aaKnown RBP12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 GMPPAQ96IJ6 420 aaPredicted RBP12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 TMEM204Q9BSN7 226 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 SHCBP1LQ9BZQ2 653 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 ACTR6Q9GZN1 396 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 RAB17Q9H0T7 212 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 FAM120CQ9NX05 1096 aaKnown RBP12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 PAQR5Q9NXK6 330 aaPredicted RBP12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 XPR1Q9UBH6 696 aa12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 MRTO4Q9UKD2 239 aaKnown RBP12.73□□□□□ -0.37
CHMP1A-210ENST00000551981 ABCA1O95477 2261 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 EIF1AYO14602 144 aaKnown RBP12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 PCDH7O60245 1069 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 SS18L1O75177 396 aaPredicted RBP12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 PLAUP00749 431 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 KRT6AP02538 564 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 KRT6BP04259 564 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 PHBP35232 272 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 IDUAP35475 653 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 EIF1AXP47813 144 aaKnown RBP12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 KRT6CP48668 564 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 PSMD4P55036 377 aaKnown RBP12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 GUCY2DQ02846 1103 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 CSTF3Q12996 717 aaKnown RBP12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 ZNHIT3Q15649 155 aaPredicted RBP12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 BEND4Q6ZU67 534 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 SPATA4Q8NEY3 305 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 OR7G2Q8NG99 324 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 ZNF483Q8TF39 744 aaPredicted RBP12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 DUSP19Q8WTR2 217 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 AKAP1Q92667 903 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 BBS4Q96RK4 519 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 HBEGFQ99075 208 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 TACO1Q9BSH4 297 aaKnown RBP12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 OR10A4Q9H209 315 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 SLC35C2Q9NQQ7 365 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 GLRX2Q9NS18 164 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 MCTS1Q9ULC4 181 aaKnown RBP12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 GPR52Q9Y2T5 361 aa12.72□□□□□ -0.37
CHMP1A-210ENST00000551981 PCNX3Q9H6A9 2034 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 TLX2O43763 284 aaPredicted RBP12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 SLITRK5O94991 958 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 SYNGR4O95473 234 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 IL11P20809 199 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 PSG6Q00889 435 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 ACSM2AQ08AH3 577 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 SPIN4Q56A73 249 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 LGSNQ5TDP6 509 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 ACSM2BQ68CK6 577 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 GGNQ86UU5 652 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 MAPK1IP1LQ8NDC0 245 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 TMEM158Q8WZ71 300 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 GTPBP3Q969Y2 492 aaKnown RBP12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 MRPL57Q9BQC6 102 aaKnown RBP12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 REG4Q9BYZ8 158 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 TBL1XR1Q9BZK7 514 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 HHATLQ9HCP6 504 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 Q9N2J8 555 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 CLEC4AQ9UMR7 237 aa12.71□□□□□ -0.37
CHMP1A-210ENST00000551981 CR1P17927 2039 aa12.71□□□□□ -0.38
CHMP1A-210ENST00000551981 A0A087WV62 115 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 MANBAO00462 879 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 PPP6CO00743 305 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 COL6A2P12110 1019 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 ZNF17P17021 662 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 TSPAN8P19075 237 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 GSTM5P46439 218 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 SLC6A8P48029 635 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 CDH13P55290 713 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 C2orf54Q08AI8 447 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 C17orf67Q0P5P2 114 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 RASA2Q15283 850 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 ADAM5Q6NVV9 412 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 ZDHHC24Q6UX98 284 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 RPS27LQ71UM5 84 aaKnown RBP12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 MARCH3Q86UD3 253 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 WDR75Q8IWA0 830 aaKnown RBP12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 CDYL2Q8N8U2 506 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 STEAP2Q8NFT2 490 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 C16orf78Q8WTQ4 265 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 FBXW5Q969U6 566 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 C1QTNF3Q9BXJ4 246 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 MRPL46Q9H2W6 279 aaKnown RBP12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 C3orf14Q9HBI5 128 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 NGBQ9NPG2 151 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 FLRT3Q9NZU0 649 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 RNF115Q9Y4L5 304 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 SNX8Q9Y5X2 465 aa12.7□□□□□ -0.38
CHMP1A-210ENST00000551981 A0A087WZY1 265 aa12.69□□□□□ -0.38
CHMP1A-210ENST00000551981 IGLV3-32A0A0A0MS00 114 aa12.69□□□□□ -0.38
CHMP1A-210ENST00000551981 OVOL3O00110 214 aa12.69□□□□□ -0.38
CHMP1A-210ENST00000551981 CD5LO43866 347 aa12.69□□□□□ -0.38
CHMP1A-210ENST00000551981 ULK1O75385 1050 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms