RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SIT1Q9Y3P8 196 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 CSNK1G3Q9Y6M4 447 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 KNL1Q8NG31 2342 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 ARID1BQ8NFD5 2236 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-208ENST00000551338 RP1P56715 2156 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 EXPH5Q8NEV8 1989 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 MN1Q10571 1320 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-208ENST00000551338 H0YIG0 161 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 HRKO00198 91 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 PEX12O00623 359 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 BRINP1O60477 761 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 BCAS1O75363 584 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-208ENST00000551338 CDC123O75794 336 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-208ENST00000551338 LYPD3O95274 346 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 STSP08842 583 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 PRG2P13727 222 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 NID1P14543 1247 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 GSTM3P21266 225 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 NR4A1P22736 598 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 HTR2AP28223 471 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 ALDH4A1P30038 563 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 C21orf33P30042 268 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-208ENST00000551338 SSTR4P31391 388 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 GABRA3P34903 492 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 SLC15A1P46059 708 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 GCGRP47871 477 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 OMPP47874 163 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 EMDP50402 254 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 AFF3P51826 1226 aaKnown RBP10.69□□□□□ -0.7
RAB5C-208ENST00000551338 EMP3P54852 163 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 BTG2P78543 158 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 SLC13A2Q13183 592 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 KCNAB1Q14722 419 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 SPCS2Q15005 226 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 CTF1Q16619 201 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 DECR1Q16698 335 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 MRPL2Q5T653 305 aaKnown RBP10.69□□□□□ -0.7
RAB5C-208ENST00000551338 AP1ARQ63HQ0 302 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 NPSR1Q6W5P4 371 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 ZNF730Q6ZMV8 503 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 LSRQ86X29 649 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-208ENST00000551338 SLC25A45Q8N413 288 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 OR8D4Q8NGM9 314 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 PIGXQ8TBF5 258 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 ACOT11Q8WXI4 607 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-208ENST00000551338 FGF11Q92914 225 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 MMABQ96EY8 250 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-208ENST00000551338 ZDHHC12Q96GR4 267 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 IL4I1Q96RQ9 567 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 BCL7BQ9BQE9 202 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 IER2Q9BTL4 223 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 PLA2G12AQ9BZM1 189 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 DSN1Q9H410 356 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 ERVMER34-1Q9H9K5 563 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 TIMMDC1Q9NPL8 285 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 ENAMQ9NRM1 1142 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 IRAK4Q9NWZ3 460 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 CNOT2Q9NZN8 540 aaKnown RBP10.69□□□□□ -0.7
RAB5C-208ENST00000551338 DNAJC27Q9NZQ0 273 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 ZNF232Q9UNY5 417 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 DTX4Q9Y2E6 619 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 UNC13CQ8NB66 2214 aa10.69□□□□□ -0.7
RAB5C-208ENST00000551338 RANBP2P49792 3224 aaKnown RBP10.69□□□□□ -0.7
RAB5C-208ENST00000551338 HEATR5AQ86XA9 2040 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 EFCAB10A6NFE3 127 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 M0R082 166 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 ZNF749O43361 778 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 KLF4O43474 513 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 NUDT21O43809 227 aaKnown RBP10.68□□□□□ -0.7
RAB5C-208ENST00000551338 ENTPD6O75354 484 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 KCNK2O95069 426 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 IGKV1D-16P01601 117 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 CLPSP04118 112 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 GUSBP08236 651 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 ADORA3P0DMS8 318 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 CDK4P11802 303 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 PIPP12273 146 aaPredicted RBP10.68□□□□□ -0.7
RAB5C-208ENST00000551338 MYF5P13349 255 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 ZNF182P17025 639 aaPredicted RBP10.68□□□□□ -0.7
RAB5C-208ENST00000551338 TNNI3P19429 210 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 MAOAP21397 527 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 IFNA8P32881 189 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 STT3AP46977 705 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 RNF144AP50876 292 aaPredicted RBP10.68□□□□□ -0.7
RAB5C-208ENST00000551338 HSD17B7P56937 341 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 CDK5Q00535 292 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 STX4Q12846 297 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 TSPAN31Q12999 210 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 GINS1Q14691 196 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 GRM7Q14831 915 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 ACSM5Q6NUN0 579 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 TSSK4Q6SA08 328 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 CASP12Q6UXS9 341 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 RASSF6Q6ZTQ3 369 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 MRGPREQ86SM8 312 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 CARFQ8N187 725 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 STX19Q8N4C7 294 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 TCEANCQ8N8B7 351 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 POGLUT1Q8NBL1 392 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 B3GNT7Q8NFL0 401 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms