RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ANKRD34CP0C6C1 535 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 GKN3PP0CG01 181 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 CDH2P19022 906 aaPredicted RBP18.26■□□□□ 0.51
SSH1-209ENST00000551165 RPS4Y1P22090 263 aaKnown RBP18.26■□□□□ 0.51
SSH1-209ENST00000551165 RYKP34925 604 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 MPLP40238 635 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 SMN1Q16637 294 aaKnown RBP18.26■□□□□ 0.51
SSH1-209ENST00000551165 TMEM236Q5W0B7 351 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 FBLIM1Q8WUP2 373 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 PSD2Q9BQI7 771 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 FANCEQ9HB96 536 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 OCIAD1Q9NX40 245 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 CDC14AQ9UNH5 594 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 POFUT2Q9Y2G5 429 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 IFT52Q9Y366 437 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 A0A1W2PRQ8 180 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 M0R129 80 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 CRHBPP24387 322 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 FMO3P31513 532 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 RGS8P57771 180 aaPredicted RBP18.26■□□□□ 0.51
SSH1-209ENST00000551165 DGCR6Q14129 220 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 SERTAD2Q14140 314 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 PHF19Q5T6S3 580 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 PGBD2Q6P3X8 592 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 ZSCAN1Q8NBB4 408 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 PITX2Q99697 317 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 GPA33Q99795 319 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 R4GN57 208 aa18.26■□□□□ 0.51
SSH1-209ENST00000551165 XPNPEP2O43895 674 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 PRAMEF2O60811 474 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 PTNP21246 168 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 ZNF136P52737 540 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 ZNF528Q3MIS6 628 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 ENTPD8Q5MY95 495 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 MRPL2Q5T653 305 aaKnown RBP18.25■□□□□ 0.51
SSH1-209ENST00000551165 DIO2Q92813 273 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 HRASLS5Q96KN8 279 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 RHNO1Q9BSD3 238 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 ZNF556Q9HAH1 456 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 PAK1IP1Q9NWT1 392 aaPredicted RBP18.25■□□□□ 0.51
SSH1-209ENST00000551165 ZNF232Q9UNY5 417 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 SYPP08247 313 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 TAS2R41P59536 307 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 IL18R1Q13478 541 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 LARS2Q15031 903 aaKnown RBP18.25■□□□□ 0.51
SSH1-209ENST00000551165 QSOX2Q6ZRP7 698 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 RABEPKQ7Z6M1 372 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 MORN4Q8NDC4 146 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 BPIFB6Q8NFQ5 453 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 ADAMTS16Q8TE57 1224 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 CTRCQ99895 268 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 OR8D2Q9GZM6 311 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 VN1R1Q9GZP7 353 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 REV1Q9UBZ9 1251 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 MKL2Q9ULH7 1088 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 MMACHCQ9Y4U1 282 aa18.25■□□□□ 0.51
SSH1-209ENST00000551165 TRIM64CA6NLI5 447 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 VGLL3A8MV65 326 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 FAAHO00519 579 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 SOX14O95416 240 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 ZNHIT3Q15649 155 aaPredicted RBP18.24■□□□□ 0.51
SSH1-209ENST00000551165 FLYWCH1Q4VC44 716 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 FAAH2Q6GMR7 532 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 RHBDD2Q6NTF9 364 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 ZER1Q7Z7L7 766 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 ENTHD1Q8IYW4 607 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 HDAC2Q92769 488 aaKnown RBP18.24■□□□□ 0.51
SSH1-209ENST00000551165 MCHR1Q99705 422 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 SLC7A5P2Q9GIP4 190 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 SIDT1Q9NXL6 827 aaKnown RBP18.24■□□□□ 0.51
SSH1-209ENST00000551165 A0A087WUU8 490 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 ARRDC5A6NEK1 342 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 DBIP07108 87 aaKnown RBP18.24■□□□□ 0.51
SSH1-209ENST00000551165 THBS1P07996 1170 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 CCNYL3P0C7X3 344 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 NID1P14543 1247 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 EEF1B2P24534 225 aaKnown RBP18.24■□□□□ 0.51
SSH1-209ENST00000551165 HLCSP50747 726 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 NR1H2P55055 460 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 ACY1Q03154 408 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 TARDBPQ13148 414 aaKnown RBP eCLIP18.24■□□□□ 0.516e-6■■■□□ 19.2
SSH1-209ENST00000551165 MAD2L1BPQ15013 274 aaPredicted RBP18.24■□□□□ 0.51
SSH1-209ENST00000551165 NSDHLQ15738 373 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 PDZK1Q5T2W1 519 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 LANCL3Q6ZV70 420 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 MED25Q71SY5 747 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 NKAIN4Q8IVV8 208 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 SLITRK4Q8IW52 837 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 OR4K5Q8NGD3 323 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 APH1BQ8WW43 257 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 GFM1Q96RP9 751 aaKnown RBP18.24■□□□□ 0.51
SSH1-209ENST00000551165 KLHL28Q9NXS3 571 aa18.24■□□□□ 0.51
SSH1-209ENST00000551165 A0A087WXM4 84 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 SLC1A7O00341 560 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 SCRG1O75711 98 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 CYP7B1O75881 506 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 HTR1AP08908 422 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 CHMP24386 653 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 HTR2AP28223 471 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 SLC37A1P57057 533 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms