RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 UCN3Q969E3 161 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 PNPLA2Q96AD5 504 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 SLC22A18Q96BI1 424 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 NTNG2Q96CW9 530 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 C16orf45Q96MC5 204 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 NAT9Q9BTE0 207 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 TSSK1BQ9BXA7 367 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 DRC3Q9H069 523 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF700Q9H0M5 742 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 CDC42EP4Q9H3Q1 356 aaKnown RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 CLMPQ9H6B4 373 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 POPDC3Q9HBV1 291 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF160Q9HCG1 818 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF304Q9HCX3 659 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 ASF1BQ9NVP2 202 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 UTP6Q9NYH9 597 aaKnown RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 TAS2R13Q9NYV9 303 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 HCN3Q9P1Z3 774 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 IFT80Q9P2H3 777 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 ERRFI1Q9UJM3 462 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 PTBP2Q9UKA9 531 aaKnown RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 DOCK7Q96N67 2140 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 ANKRD17O75179 2603 aaKnown RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 ZANQ9Y493 2812 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 A0A0G2JMM0 328 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 A0A0G2JN53 185 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 A0A1W2PPB8 328 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 A0A1W2PRS3 328 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 FAM90A18PA6NE21 464 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 FAM90A16PA6NEW6 464 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 FAM90A9PA6NNJ1 464 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 KIR3DP1A8MWS1 328 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 FAM90A5PA8MXJ8 464 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 B4DXG7 233 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 C9J4A7 227 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 H0YIG0 161 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 MKRN2OSH3BPM6 223 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 UBXN8O00124 270 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 TNFRSF13BO14836 293 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 EIF3HO15372 352 aaKnown RBP eCLIP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 ZNHIT1O43257 154 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 NEURL1O76050 574 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 SCELO95171 688 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 CBX6O95503 412 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 GUCA1CO95843 209 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 HPP00738 406 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 F10P00742 488 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 LDLRP01130 860 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 IFNA2P01563 188 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 EIF2S1P05198 315 aaKnown RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 KLK3P07288 261 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 FAM90A15PP0C7V4 464 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 FAM90A14PP0C7W9 464 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 ARRB2P32121 409 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 PPARGP37231 505 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 MAGEA4P43358 317 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 XCR1P46094 333 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 ARSFP54793 590 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 PLTPP55058 493 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 AP1S2P56377 157 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 RPS15AP62244 130 aaKnown RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 BTG2P78543 158 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 SARNPP82979 210 aaKnown RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 PMP22Q01453 160 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 TRAF3Q13114 568 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 MFAP5Q13361 173 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 UAP1Q16222 522 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 TUBB8Q3ZCM7 444 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 GARNL3Q5VVW2 1013 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 FAAH2Q6GMR7 532 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 PRMT9Q6P2P2 845 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 CYB5D1Q6P9G0 228 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 ANKRD37Q7Z713 158 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 TMPRSS11BQ86T26 416 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 ASPGQ86U10 573 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 RAB43Q86YS6 212 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 SIAH3Q8IW03 269 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 CA13Q8N1Q1 262 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF321PQ8N8H1 164 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 PPP4R1Q8TF05 950 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 DCAKDQ8WVC6 231 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 KCTD4Q8WVF5 259 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 SKA2Q8WVK7 121 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 SLC5A11Q8WWX8 675 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 MS4A6EQ96DS6 147 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 THOC3Q96J01 351 aaKnown RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 CABS1Q96KC9 395 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 SIGLEC12Q96PQ1 595 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 CRB3Q9BUF7 120 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 SORBS1Q9BX66 1292 aaKnown RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 MS4A8Q9BY19 250 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 RBM38Q9H0Z9 239 aaKnown RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 MAP6D1Q9H9H5 199 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 PELI2Q9HAT8 420 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 OBP2BQ9NPH6 170 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 FAM114A2Q9NRY5 505 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 TRPC4Q9UBN4 977 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 RNF14Q9UBS8 474 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 C3orf18Q9UK00 162 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 EMCNQ9ULC0 261 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms