RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 FIG4Q92562 907 aa14.39□□□□□ -0.11
COX6A1-203ENST00000550009 POLDIP3Q9BY77 421 aaKnown RBP14.39□□□□□ -0.11
COX6A1-203ENST00000550009 STMN4Q9H169 189 aaPredicted RBP14.39□□□□□ -0.11
COX6A1-203ENST00000550009 CCM2LQ9NUG4 571 aaPredicted RBP14.39□□□□□ -0.11
COX6A1-203ENST00000550009 SH3BP4Q9P0V3 963 aa14.39□□□□□ -0.11
COX6A1-203ENST00000550009 ZNF629Q9UEG4 869 aaPredicted RBP14.39□□□□□ -0.11
COX6A1-203ENST00000550009 ZNF337Q9Y3M9 751 aa14.39□□□□□ -0.11
COX6A1-203ENST00000550009 ACANP16112 2415 aa14.39□□□□□ -0.11
COX6A1-203ENST00000550009 ABCB7O75027 752 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 IL33O95760 270 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 OPN1LWP04000 364 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 BCKDHAP12694 445 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 HK1P19367 917 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 GSTM5P46439 218 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 ART1P52961 327 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 CLDN20P56880 219 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 PDE7AQ13946 482 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 RCAN2Q14206 197 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 POU4F3Q15319 338 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 FLYWCH1Q4VC44 716 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 CCNJQ5T5M9 372 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 VWA1Q6PCB0 445 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 FIGNL1Q6PIW4 674 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 DDIASQ8IXT1 998 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 SLC16A11Q8NCK7 471 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 AENQ8WTP8 325 aaKnown RBP14.38□□□□□ -0.11
COX6A1-203ENST00000550009 SLC9A6Q92581 669 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 ZNF845Q96IR2 970 aaPredicted RBP14.38□□□□□ -0.11
COX6A1-203ENST00000550009 C1orf50Q9BV19 199 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 REEP4Q9H6H4 257 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 RASSF1Q9NS23 344 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 SIRT3Q9NTG7 399 aaPredicted RBP14.38□□□□□ -0.11
COX6A1-203ENST00000550009 MKS1Q9NXB0 559 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 GALNT8Q9NY28 637 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 LGALS13Q9UHV8 139 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 ZDHHC2Q9UIJ5 367 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 PLEKHA6Q9Y2H5 1048 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 TRAF6Q9Y4K3 522 aa14.38□□□□□ -0.11
COX6A1-203ENST00000550009 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 A6NNC1 897 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 FAM47E-STBD1D6RA91 191 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 SEC14L5O43304 696 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 RGS14O43566 566 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 ITM2AO43736 263 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 PEX11AO75192 247 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 SKAP2O75563 359 aaPredicted RBP14.37□□□□□ -0.11
COX6A1-203ENST00000550009 LYPLA1O75608 230 aaPredicted RBP14.37□□□□□ -0.11
COX6A1-203ENST00000550009 TNFSF13O75888 250 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 RCBTB2O95199 551 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 NUDT17P0C025 328 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 GPC1P35052 558 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 FRKP42685 505 aaPredicted RBP14.37□□□□□ -0.11
COX6A1-203ENST00000550009 MRPS22P82650 360 aaKnown RBP14.37□□□□□ -0.11
COX6A1-203ENST00000550009 DUSP5Q16690 384 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 CYP27C1Q4G0S4 372 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 RAET1LQ5VY80 246 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 IKBIPQ70UQ0 350 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 SZRD1Q7Z422 152 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 CDC20BQ86Y33 519 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 KRTCAP2Q8N6L1 136 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 NUP43Q8NFH3 380 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 OR4C3Q8NH37 302 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 GPR151Q8TDV0 419 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 SMPDL3BQ92485 455 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 HOXB13Q92826 284 aaPredicted RBP14.37□□□□□ -0.11
COX6A1-203ENST00000550009 PPCDCQ96CD2 204 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 PKNOX2Q96KN3 472 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 CCT7Q99832 543 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 CLEC4MQ9H2X3 399 aaPredicted RBP14.37□□□□□ -0.11
COX6A1-203ENST00000550009 KCNE3Q9Y6H6 103 aa14.37□□□□□ -0.11
COX6A1-203ENST00000550009 SETD2Q9BYW2 2564 aaPredicted RBP14.37□□□□□ -0.11
COX6A1-203ENST00000550009 NPIPA5A0A0B4J1W7 369 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 OR2M5A3KFT3 312 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 NPIPA7E9PJI5 369 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 H3BML4 177 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 OIP5O43482 229 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 HCRTR2O43614 444 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 SLU7O95391 586 aaKnown RBP14.36□□□□□ -0.11
COX6A1-203ENST00000550009 ANGPTL1O95841 491 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 NPIPA8P0DM63 369 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 LAMP1P11279 417 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 DSCR4P56555 118 aaPredicted RBP14.36□□□□□ -0.11
COX6A1-203ENST00000550009 PTGR1Q14914 329 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 DECR1Q16698 335 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 ENPP6Q6UWR7 440 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 SPNS3Q6ZMD2 512 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 GRAMD2AQ8IUY3 354 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 WNT2BQ93097 391 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 ZNF524Q96C55 264 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 ARSGQ96EG1 525 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 C1GALT1C1Q96EU7 318 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 PPP1R36Q96LQ0 422 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 RBM24Q9BX46 236 aaKnown RBP14.36□□□□□ -0.11
COX6A1-203ENST00000550009 PPCSQ9HAB8 311 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 Q9N2J8 555 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 MRPS18CQ9Y3D5 142 aaKnown RBP14.36□□□□□ -0.11
COX6A1-203ENST00000550009 C2CD3Q4AC94 2353 aa14.36□□□□□ -0.11
COX6A1-203ENST00000550009 NF1P21359 2839 aa14.35□□□□□ -0.11
COX6A1-203ENST00000550009 A0A1W2PNV4 684 aa14.35□□□□□ -0.11
COX6A1-203ENST00000550009 WDR91A4D1P6 747 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms