RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 SERHL2Q9H4I8 314 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 WDR55Q9H6Y2 383 aaPredicted RBP8.89□□□□□ -0.99
HDAC7-229ENST00000549883 Q9N2J8 555 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 NPDC1Q9NQX5 325 aaPredicted RBP8.89□□□□□ -0.99
HDAC7-229ENST00000549883 RYDENQ9NUL5 291 aaKnown RBP8.89□□□□□ -0.99
HDAC7-229ENST00000549883 MARCOQ9UEW3 520 aaPredicted RBP8.89□□□□□ -0.99
HDAC7-229ENST00000549883 CAMK2AQ9UQM7 478 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 RPH3AQ9Y2J0 694 aaPredicted RBP8.89□□□□□ -0.99
HDAC7-229ENST00000549883 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.89□□□□□ -0.99
HDAC7-229ENST00000549883 SNX8Q9Y5X2 465 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 CENPEQ02224 2701 aa8.89□□□□□ -0.99
HDAC7-229ENST00000549883 NPIPA5A0A0B4J1W7 369 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 GOLGA8QA0A0J9YX86 632 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 GOLGA8OA6NCC3 632 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 FIGNL2A6NMB9 653 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 SHISA8B8ZZ34 492 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 NPIPA7E9PJI5 369 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 GOLGA8NF8WBI6 632 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 WDR1O75083 606 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 SNNO75324 88 aaPredicted RBP8.88□□□□□ -0.99
HDAC7-229ENST00000549883 CBR3O75828 277 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 KCNK2O95069 426 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 HMGN2P05204 90 aaKnown RBP8.88□□□□□ -0.99
HDAC7-229ENST00000549883 IFI6P09912 130 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 NPIPA8P0DM63 369 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 KITP10721 976 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 PRPS1L1P21108 318 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 CASP9P55211 416 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 NME5P56597 212 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 B3GALT5-AS1P59052 145 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 RPS26P62854 115 aaKnown RBP8.88□□□□□ -0.99
HDAC7-229ENST00000549883 HBA1P69905 142 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 SRYQ05066 204 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 TFF3Q07654 80 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 SNTB1Q13884 538 aaKnown RBP8.88□□□□□ -0.99
HDAC7-229ENST00000549883 LASP1Q14847 261 aaKnown RBP8.88□□□□□ -0.99
HDAC7-229ENST00000549883 MLC1Q15049 377 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 DECR1Q16698 335 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 TTMPQ5BVD1 217 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 TMEM211Q6ICI0 200 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 POMZP3Q6PJE2 187 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 R3HCC1LQ7Z5L2 792 aaKnown RBP8.88□□□□□ -0.99
HDAC7-229ENST00000549883 CROCCP2Q86T23 111 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 ANKRD46Q86W74 232 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 WDR75Q8IWA0 830 aaKnown RBP8.88□□□□□ -0.99
HDAC7-229ENST00000549883 MCEMP1Q8IX19 187 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 ZNF295-AS1Q8N0V1 137 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 FADS6Q8N9I5 356 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 GATSQ8NAP1 163 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 OR14L1PQ8NHC6 308 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 FAM110BQ8TC76 370 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 DUSP19Q8WTR2 217 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 OR5P2Q8WZ92 322 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 CDS1Q92903 461 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 ABTB1Q969K4 478 aaPredicted RBP8.88□□□□□ -0.99
HDAC7-229ENST00000549883 NPAS1Q99742 590 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 G6PC3Q9BUM1 346 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 DUSP26Q9BV47 211 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 PRDM14Q9GZV8 571 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 MEAF6Q9HAF1 191 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 ZCCHC3Q9NUD5 404 aaKnown RBP8.88□□□□□ -0.99
HDAC7-229ENST00000549883 GPATCH2Q9NW75 528 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 ASIC5Q9NY37 505 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 TAS2R10Q9NYW0 307 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 NOP53Q9NZM5 478 aaKnown RBP8.88□□□□□ -0.99
HDAC7-229ENST00000549883 PPP4R1LQ9P1A2 415 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 EIF3LQ9Y262 564 aaKnown RBP8.88□□□□□ -0.99
HDAC7-229ENST00000549883 MPDZO75970 2070 aa8.88□□□□□ -0.99
HDAC7-229ENST00000549883 FBN2P35556 2912 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 H0YC42 278 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 CFLARO15519 480 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 HNRNPRO43390 633 aaKnown RBP8.87□□□□□ -0.99
HDAC7-229ENST00000549883 OIP5O43482 229 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 SCN2BO60939 215 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 LBPP18428 481 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 DPP4P27487 766 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 EPHA3P29320 983 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 IL12AP29459 219 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 CHRNB4P30926 498 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 SRD5A2P31213 254 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 CCT3P49368 545 aaKnown RBP8.87□□□□□ -0.99
HDAC7-229ENST00000549883 LHX2P50458 406 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 AGFG1P52594 562 aaKnown RBP8.87□□□□□ -0.99
HDAC7-229ENST00000549883 DGKQP52824 942 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 TPD52P55327 224 aaPredicted RBP8.87□□□□□ -0.99
HDAC7-229ENST00000549883 GFRA1P56159 465 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 CLDN15P56746 228 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 C21orf58P58505 322 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 UFM1P61960 85 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 OCRLQ01968 901 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 TP53BP2Q13625 1128 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 ZNHIT3Q15649 155 aaPredicted RBP8.87□□□□□ -0.99
HDAC7-229ENST00000549883 NHSL2Q5HYW2 709 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 ACAD11Q709F0 780 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 EID3Q8N140 333 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 CDRT4Q8N9R6 151 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 ACBD4Q8NC06 268 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 RELL2Q8NC24 303 aaPredicted RBP8.87□□□□□ -0.99
HDAC7-229ENST00000549883 OR4K17Q8NGC6 315 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 OR5D16Q8NGK9 328 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms