RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 KCNE4Q8WWG9 221 aa16.06■□□□□ 0.16
LETMD1-220ENST00000549686 PINK1Q9BXM7 581 aa16.06■□□□□ 0.16
LETMD1-220ENST00000549686 ARMC1Q9NVT9 282 aa16.06■□□□□ 0.16
LETMD1-220ENST00000549686 MKLN1Q9UL63 735 aa16.06■□□□□ 0.16
LETMD1-220ENST00000549686 AURKCQ9UQB9 309 aa16.06■□□□□ 0.16
LETMD1-220ENST00000549686 AP4S1Q9Y587 144 aa16.06■□□□□ 0.16
LETMD1-220ENST00000549686 OR6C70A6NIJ9 312 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 ZNF891A8MT65 544 aaPredicted RBP16.05■□□□□ 0.16
LETMD1-220ENST00000549686 SYT5O00445 386 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 PRKNO60260 465 aaPredicted RBP16.05■□□□□ 0.16
LETMD1-220ENST00000549686 ZIC2O95409 532 aaPredicted RBP16.05■□□□□ 0.16
LETMD1-220ENST00000549686 NGFRP08138 427 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 RPS4Y1P22090 263 aaKnown RBP16.05■□□□□ 0.16
LETMD1-220ENST00000549686 ABCD3P28288 659 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 KCNJ5P48544 419 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 PNLIPRP2P54317 469 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 ATP12AP54707 1039 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 RRADP55042 308 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 AIMP2Q13155 320 aaKnown RBP16.05■□□□□ 0.16
LETMD1-220ENST00000549686 GPR68Q15743 365 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 ZNF141Q15928 474 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 IFI44LQ53G44 452 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 EIPR1Q53HC9 387 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 ZNF311Q5JNZ3 666 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 DCAF10Q5QP82 559 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 FKBP9P1Q75LS8 142 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 ZNF527Q8NB42 609 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 GEMIN6Q8WXD5 167 aaKnown RBP16.05■□□□□ 0.16
LETMD1-220ENST00000549686 PROX1Q92786 737 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 TMBIM1Q969X1 311 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 OMA1Q96E52 524 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 SLC47A1Q96FL8 570 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 TPD52L3Q96J77 140 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 HSH2DQ96JZ2 352 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 RASSF4Q9H2L5 321 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 ATP13A2Q9NQ11 1180 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 UBQLN4Q9NRR5 601 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 KLHL28Q9NXS3 571 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 SLC13A4Q9UKG4 626 aa16.05■□□□□ 0.16
LETMD1-220ENST00000549686 CDC14CA4D256 554 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 TMEM200CA6NKL6 621 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 NPIPB9F8W1W9 429 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 CDK2AP1O14519 115 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 HNRNPRO43390 633 aaKnown RBP16.04■□□□□ 0.16
LETMD1-220ENST00000549686 TSPAN2O60636 221 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 REM1O75628 298 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 PPM1BO75688 479 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 IGKV1D-16P01601 117 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 OPN1SWP03999 348 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 IL7RP16871 459 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 SPINK2P20155 84 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 CD247P20963 164 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 ENDOUP21128 410 aaKnown RBP16.04■□□□□ 0.16
LETMD1-220ENST00000549686 DCTP40126 519 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 RFX3P48380 749 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 KCNC4Q03721 635 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 TBCELQ5QJ74 424 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 RNF220Q5VTB9 566 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 TCTN3Q6NUS6 607 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 H3F3CQ6NXT2 135 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 ENPP6Q6UWR7 440 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 GALNT10Q86SR1 603 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 VASH2Q86V25 355 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 CMIPQ8IY22 773 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 TMEM102Q8N9M5 508 aaPredicted RBP16.04■□□□□ 0.16
LETMD1-220ENST00000549686 CLEC1AQ8NC01 280 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 PYDC1Q8WXC3 89 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 ZNF354BQ96LW1 612 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 HHATLQ9HCP6 504 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 YARS2Q9Y2Z4 477 aaKnown RBP16.04■□□□□ 0.16
LETMD1-220ENST00000549686 NPFFR2Q9Y5X5 522 aa16.04■□□□□ 0.16
LETMD1-220ENST00000549686 WWP2O00308 870 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 UGT2B17O75795 530 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 KRT36O76013 467 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 NADKO95544 446 aaPredicted RBP16.03■□□□□ 0.16
LETMD1-220ENST00000549686 FESP07332 822 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 ADRB1P08588 477 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 NID1P14543 1247 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 ITGA2P17301 1181 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 ERFP50548 548 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 OPN5Q6U736 354 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 NUP54Q7Z3B4 507 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 RPS19BP1Q86WX3 136 aaKnown RBP16.03■□□□□ 0.16
LETMD1-220ENST00000549686 SMYD1Q8NB12 490 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 SLC35B4Q969S0 331 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 SLCO4A1Q96BD0 722 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 EFHD2Q96C19 240 aaPredicted RBP16.03■□□□□ 0.16
LETMD1-220ENST00000549686 SEPHS2Q99611 448 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 CHID1Q9BWS9 393 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 RNPEPL1Q9HAU8 725 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 IL1RAPQ9NPH3 570 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.03■□□□□ 0.16
LETMD1-220ENST00000549686 WDR70Q9NW82 654 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 FBXO34Q9NWN3 711 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 TEKT2Q9UIF3 430 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 ZNF443Q9Y2A4 671 aaPredicted RBP16.03■□□□□ 0.16
LETMD1-220ENST00000549686 SLC9A8Q9Y2E8 581 aa16.03■□□□□ 0.16
LETMD1-220ENST00000549686 CFAP54Q96N23 3096 aa16.02■□□□□ 0.16
LETMD1-220ENST00000549686 TMEM229AB2RXF0 380 aa16.02■□□□□ 0.16
LETMD1-220ENST00000549686 H3BNX3 289 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms