RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 LARS2Q15031 903 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 LRIT3Q3SXY7 679 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 ADAMTSL4Q6UY14 1074 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 RPTNQ6XPR3 784 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF438Q7Z4V0 828 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 RAB43Q86YS6 212 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 NEIL3Q8TAT5 605 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 SPRYD4Q8WW59 207 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 COX14Q96I36 57 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 LINC00615Q96LM1 132 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 FYTTD1Q96QD9 318 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 PRDM7Q9NQW5 492 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 NFKBIL1Q9UBC1 381 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 GSTK1Q9Y2Q3 226 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 KLK4Q9Y5K2 254 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 FRYLO94915 3013 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 EMC8O43402 210 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 CLEC3AO75596 197 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 BMP7P18075 431 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 LIMS1P48059 325 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 WNT4P56705 351 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 RAB15P59190 212 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 RPS21P63220 83 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 FABP5Q01469 135 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 ST3GAL3Q11203 375 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 ZFP69Q49AA0 526 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF658BQ4V348 819 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 C10orf53Q8N6V4 93 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 ASB15Q8WXK1 588 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 PRRC1Q96M27 445 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 PTCHD1Q96NR3 888 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 DEPDC7Q96QD5 511 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 MYADMQ96S97 322 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 BCL7BQ9BQE9 202 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 TEX12Q9BXU0 123 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 SLC38A1Q9H2H9 487 aa12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 ISG20L2Q9H9L3 353 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 CNOT2Q9NZN8 540 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-209ENST00000548825 SMLR1H3BR10 107 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 GUCY1B2O75343 617 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 LGI1O95970 557 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 PEPDP12955 493 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 CPMP14384 443 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 PCSK2P16519 638 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 UGT2B10P36537 528 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 VSX2P58304 361 aaPredicted RBP12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 TRAM2Q15035 370 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 P2RY14Q15391 338 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 DUSP5Q16690 384 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 DDI2Q5TDH0 399 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 OTPQ5XKR4 325 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF776Q68DI1 518 aaPredicted RBP12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 PEX5LQ8IYB4 626 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 PRSS58Q8IYP2 241 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 NANOGP1Q8N7R0 232 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 SLC41A3Q96GZ6 507 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 PLSCR3Q9NRY6 295 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 NLKQ9UBE8 527 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 FBXL4Q9UKA2 621 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 MED12Q93074 2177 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 A8MVJ9 347 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 LRRN3E7EW58 273 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 J3QLW9 94 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 CDC42EP2O14613 210 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 OR10H2O60403 315 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF19P17023 458 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 PEBP1P30086 187 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 GABRA3P34903 492 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 SLC36A4Q6YBV0 504 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 ENKD1Q9H0I2 346 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 LRRN3Q9H3W5 708 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 WASH6PQ9NQA3 447 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 ASB4Q9Y574 426 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 UNC13CQ8NB66 2214 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 C12orf71A8MTZ7 269 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 SGK494L7N484 410 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 P2RX6O15547 441 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 DRD2P14416 443 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 CTBP2P56545 445 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 SNRPD2P62316 118 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF765Q7L2R6 523 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 ZNF559Q9BR84 538 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 ACSS1Q9NUB1 689 aaPredicted RBP12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 PAQR5Q9NXK6 330 aaPredicted RBP12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 KCMF1Q9P0J7 381 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 TNFRSF10DQ9UBN6 386 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 UGT2A1Q9Y4X1 527 aa12.78□□□□□ -0.36
PRPF40B-209ENST00000548825 PRSS38A1L453 326 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 H3BQ06 376 aaPredicted RBP12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 SLC2A2P11168 524 aaPredicted RBP12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 IFNGR2P38484 337 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 NAA10P41227 235 aaPredicted RBP12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 SRP54P61011 504 aaKnown RBP12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 SCN1BQ07699 218 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 ARHGAP19Q14CB8 494 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 NDUFAF6Q330K2 333 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 SLC48A1Q6P1K1 146 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 PROKR2Q8NFJ6 384 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 RAB7BQ96AH8 199 aa12.77□□□□□ -0.36
PRPF40B-209ENST00000548825 ORAI1Q96D31 301 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms