RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ALOX5P09917 674 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 ALDOCP09972 364 aaKnown RBP14.36□□□□□ -0.11
DDX54-205ENST00000548786 GLI4P10075 376 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 BMP7P18075 431 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 CCT3P49368 545 aaKnown RBP14.36□□□□□ -0.11
DDX54-205ENST00000548786 SLC18A1P54219 525 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 GAS1P54826 345 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 RPS26P62854 115 aaKnown RBP14.36□□□□□ -0.11
DDX54-205ENST00000548786 HBA1P69905 142 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 OCRLQ01968 901 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 CRYZQ08257 329 aaKnown RBP14.36□□□□□ -0.11
DDX54-205ENST00000548786 MLC1Q15049 377 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 SMU1Q2TAY7 513 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 GRAMD1BQ3KR37 738 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 LSM12Q3MHD2 195 aaKnown RBP14.36□□□□□ -0.11
DDX54-205ENST00000548786 TMEM211Q6ICI0 200 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 TRIM42Q8IWZ5 723 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 ULK2Q8IYT8 1036 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 KIRREL3Q8IZU9 778 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 COX18Q8N8Q8 333 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 GATSQ8NAP1 163 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 CDS1Q92903 461 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 TIMP4Q99727 224 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 TTYH2Q9BSA4 534 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 UGT2B28Q9BY64 529 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 TBL1XR1Q9BZK7 514 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 BHLHE41Q9C0J9 482 aaPredicted RBP14.36□□□□□ -0.11
DDX54-205ENST00000548786 DSN1Q9H410 356 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 FBXO34Q9NWN3 711 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 TAS2R10Q9NYW0 307 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 MED11Q9P086 117 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 NTMQ9P121 344 aa14.36□□□□□ -0.11
DDX54-205ENST00000548786 NKX2-6A6NCS4 301 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 HDAC3O15379 428 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 FADS1O60427 444 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 CBR3O75828 277 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 CPSF4O95639 269 aaKnown RBP14.35□□□□□ -0.11
DDX54-205ENST00000548786 IFI6P09912 130 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 PRIM2P49643 509 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 PSMD4P55036 377 aaKnown RBP14.35□□□□□ -0.11
DDX54-205ENST00000548786 CASP9P55211 416 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 SRYQ05066 204 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 HDXQ7Z353 690 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 IFNEQ86WN2 208 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 GOLGA6L1Q8N7Z2 621 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 OR4A15Q8NGL6 344 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 ZNF75CPQ92670 426 aaPredicted RBP14.35□□□□□ -0.11
DDX54-205ENST00000548786 ABTB1Q969K4 478 aaPredicted RBP14.35□□□□□ -0.11
DDX54-205ENST00000548786 TEX37Q96LM6 180 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 UCK2Q9BZX2 261 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 FAM120CQ9NX05 1096 aaKnown RBP14.35□□□□□ -0.11
DDX54-205ENST00000548786 GIN1Q9NXP7 522 aa14.35□□□□□ -0.11
DDX54-205ENST00000548786 KLF2Q9Y5W3 355 aaPredicted RBP14.35□□□□□ -0.11
DDX54-205ENST00000548786 CACNA1CQ13936 2221 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 ITPR2Q14571 2701 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 TRPC5OSA6NMA1 111 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 WDR1O75083 606 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 KCNK2O95069 426 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 H2AFXP16104 143 aaPredicted RBP14.34□□□□□ -0.11
DDX54-205ENST00000548786 AGAP20933 346 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 DPP4P27487 766 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 ADH7P40394 386 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 MAP3K8P41279 467 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 KIR3DL1P43629 444 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 C21orf58P58505 322 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 UFM1P61960 85 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 POU6F2P78424 691 aaPredicted RBP14.34□□□□□ -0.11
DDX54-205ENST00000548786 ZNF630Q2M218 657 aaPredicted RBP14.34□□□□□ -0.11
DDX54-205ENST00000548786 SLC9B1Q4ZJI4 515 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 SPANXN4Q5MJ08 99 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 VASNQ6EMK4 673 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 PLXDC2Q6UX71 529 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 APOOLQ6UXV4 268 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 ACAD11Q709F0 780 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 MAVSQ7Z434 540 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 OR56A1Q8NGH5 318 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 OR5D16Q8NGK9 328 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 OR5M1Q8NGP8 315 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 RAB3IL1Q8TBN0 382 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 DUSP19Q8WTR2 217 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 RNF138Q8WVD3 245 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 MARVELD3Q96A59 401 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 SFXN2Q96NB2 322 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 OR2B2Q9GZK3 357 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 NEUROD4Q9HD90 331 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 FAF1Q9UNN5 650 aaPredicted RBP14.34□□□□□ -0.11
DDX54-205ENST00000548786 ABCG2Q9UNQ0 655 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 KCNE3Q9Y6H6 103 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 NUP214P35658 2090 aaPredicted RBP14.34□□□□□ -0.11
DDX54-205ENST00000548786 TEX15Q9BXT5 2789 aa14.34□□□□□ -0.11
DDX54-205ENST00000548786 NOTCH2Q04721 2471 aa14.33□□□□□ -0.12
DDX54-205ENST00000548786 PHF3Q92576 2039 aaKnown RBP14.33□□□□□ -0.12
DDX54-205ENST00000548786 NPIPA5A0A0B4J1W7 369 aa14.33□□□□□ -0.12
DDX54-205ENST00000548786 A0A0G2JNJ9 132 aa14.33□□□□□ -0.12
DDX54-205ENST00000548786 RNF103-CHMP3A0A140T963 221 aa14.33□□□□□ -0.12
DDX54-205ENST00000548786 TTC36A6NLP5 189 aa14.33□□□□□ -0.12
DDX54-205ENST00000548786 NPIPA7E9PJI5 369 aa14.33□□□□□ -0.12
DDX54-205ENST00000548786 ANKRD28O15084 1053 aa14.33□□□□□ -0.12
DDX54-205ENST00000548786 ANGPTL1O95841 491 aa14.33□□□□□ -0.12
DDX54-205ENST00000548786 NPIPA8P0DM63 369 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms