RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CHMP6Q96FZ7 201 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 MAGEB18Q96M61 343 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 STACQ99469 402 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 ACTRT3Q9BYD9 372 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 SERHLQ9NQF3 203 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 DUSP22Q9NRW4 184 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 PNPLA3Q9NST1 481 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 ACAD8Q9UKU7 415 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 PCDHGB4Q9UN71 923 aa17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 FAF1Q9UNN5 650 aaPredicted RBP17.08■□□□□ 0.32
PRPF40B-206ENST00000547764 PCNX1Q96RV3 2341 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 UQCRHLA0A096LP55 91 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 A1L4Q6 167 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 C17orf51A8MQB3 221 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 E9PLN8 166 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 UBDO15205 165 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 SCO2O43819 266 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 CBR3O75828 277 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 TGDSO95455 350 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 CPSF4O95639 269 aaKnown RBP17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 PDCD4Q53EL6 469 aaKnown RBP17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 EIPR1Q53HC9 387 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 BHLHB9Q6PI77 547 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 FIGNL1Q6PIW4 674 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 NCCRP1Q6ZVX7 275 aaPredicted RBP17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 CDS1Q92903 461 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 VKORC1Q9BQB6 163 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 BTBD2Q9BX70 525 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 RTN4RQ9BZR6 473 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 TP63Q9H3D4 680 aaPredicted RBP17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 PIGUQ9H490 435 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 FBXO34Q9NWN3 711 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 FAM120CQ9NX05 1096 aaKnown RBP17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 GIN1Q9NXP7 522 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 ABCG2Q9UNQ0 655 aa17.07■□□□□ 0.32
PRPF40B-206ENST00000547764 B4DXG7 233 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 CLDN1O95832 211 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 KRT16P08779 473 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 IDH3AP50213 366 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 POU6F2P78424 691 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 ADORA2A-AS1P86434 159 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 GSTA3Q16772 222 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 GRAMD1BQ3KR37 738 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 WIPI1Q5MNZ9 446 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 CCNJQ5T5M9 372 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 ACAD11Q709F0 780 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 C6orf120Q7Z4R8 191 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 ZAR1Q86SH2 424 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 YRDCQ86U90 279 aaKnown RBP17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 EID3Q8N140 333 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 GLB1L3Q8NCI6 653 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 FAM83FQ8NEG4 500 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 ADAMTS15Q8TE58 950 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 ITLN2Q8WWU7 325 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 DMRTA2Q96SC8 542 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 ZBTB18Q99592 522 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 EBF4Q9BQW3 602 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 SDR39U1Q9NRG7 319 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 PPP4R1LQ9P1A2 415 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 BTNL2Q9UIR0 455 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 FBXL2Q9UKC9 423 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 SLC6A5Q9Y345 797 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 KCNE3Q9Y6H6 103 aa17.06■□□□□ 0.32
PRPF40B-206ENST00000547764 UTP20O75691 2785 aaKnown RBP17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 C15orf38-AP3S2A0A0A6YYH1 394 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 RNF103-CHMP3A0A140T963 221 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 SLC22A3O75751 556 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 PGRP06401 933 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 CLK3P49761 638 aaKnown RBP17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 AQP5P55064 265 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 RPS26P62854 115 aaKnown RBP17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 WLSQ5T9L3 541 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 ZNF585AQ6P3V2 769 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 APOOLQ6UXV4 268 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 MRGPRGQ86SM5 289 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 MARCH3Q86UD3 253 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 OR4C3Q8NH37 302 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 PHF10Q8WUB8 498 aaKnown RBP17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 CCDC115Q96NT0 180 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 OR7D2Q96RA2 312 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 OR52E6Q96RD3 313 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 G6PC3Q9BUM1 346 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 SERHL2Q9H4I8 314 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 TCF7L2Q9NQB0 619 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 SDHAF3Q9NRP4 125 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 ZIM2Q9NZV7 527 aa17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 PLEKHB1Q9UF11 243 aaPredicted RBP17.05■□□□□ 0.32
PRPF40B-206ENST00000547764 POLR3GO15318 223 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 SOX30O94993 753 aa17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 MATN1P21941 496 aa17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 UQCRC2P22695 453 aa17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 CRYZQ08257 329 aaKnown RBP17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 STX5Q13190 355 aa17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 RPTNQ6XPR3 784 aa17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 RPRMLQ8N4K4 120 aa17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 MARVELD2Q8N4S9 558 aa17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 OR5D16Q8NGK9 328 aa17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 GOT1L1Q8NHS2 421 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 DUSP19Q8WTR2 217 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms