RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 RASSF5Q8WWW0 418 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 POP5Q969H6 163 aaKnown RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 SPACA7Q96KW9 195 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 SAMD8Q96LT4 415 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 PNO1Q9NRX1 252 aaKnown RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 MAN2C1Q9NTJ4 1040 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 LYARQ9NX58 379 aaKnown RBP11.87□□□□□ -0.51
SCAF11-209ENST00000547018 REV1Q9UBZ9 1251 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 PHF11Q9UIL8 331 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 ZNF229Q9UJW7 825 aa11.87□□□□□ -0.51
SCAF11-209ENST00000547018 HEATR5AQ86XA9 2040 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 MUC22E2RYF6 1773 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-209ENST00000547018 A0A0J9YY10 115 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 ZAR1LA6NP61 321 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 MED26O95402 600 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 ALOX5P09917 674 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 CAV3P56539 151 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 TTLL10Q6ZVT0 673 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 TRIM69Q86WT6 500 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 UBE2J2Q8N2K1 259 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 BBS1Q8NFJ9 593 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 PFN4Q8NHR9 129 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 BAHD1Q8TBE0 780 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-209ENST00000547018 GAL3ST4Q96RP7 486 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 SAP130Q9H0E3 1048 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 WSB2Q9NYS7 404 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-209ENST00000547018 SPIN1Q9Y657 262 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-209ENST00000547018 A0A0G2JPF8 293 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 A6NCN8 305 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 HNRNPCL2B2RXH8 293 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 HNRNPCL3B7ZW38 293 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 UBXN7O94888 489 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 WNT1P04628 370 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 HNRNPCL4P0DMR1 293 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 IFI30P13284 250 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 TCEA1P23193 301 aaKnown RBP11.86□□□□□ -0.51
SCAF11-209ENST00000547018 ZNF829Q3KNS6 432 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-209ENST00000547018 LRIT3Q3SXY7 679 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 SYT6Q5T7P8 510 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-209ENST00000547018 ZNF770Q6IQ21 691 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-209ENST00000547018 ARL14Q8N4G2 192 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-209ENST00000547018 BORCS5Q969J3 196 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 C1GALT1C1Q96EU7 318 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 SH3YL1Q96HL8 342 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-209ENST00000547018 C10orf90Q96M02 699 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 LMF1Q96S06 567 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 SDF2Q99470 211 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 NRSN2Q9GZP1 204 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 TSC22D4Q9Y3Q8 395 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 CHST2Q9Y4C5 530 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 PMF1-BGLAPU3KQ54 211 aa11.86□□□□□ -0.51
SCAF11-209ENST00000547018 TRAV27A0A087WT01 109 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 CLDN25C9JDP6 229 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 BOLA2-SMG1P6H3BVE0 249 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 KIAA0513O60268 411 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 IL9P15248 144 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 NOS3P29474 1203 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 CD79BP40259 229 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 CXCR4P61073 352 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 TRA2BP62995 288 aaKnown RBP11.85□□□□□ -0.51
SCAF11-209ENST00000547018 MOGQ16653 247 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 ZNF791Q3KP31 576 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-209ENST00000547018 PDZK1Q5T2W1 519 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 DESI1Q6ICB0 168 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 FRRS1Q6ZNA5 592 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 KIF18BQ86Y91 864 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 CAMKK1Q8N5S9 505 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 DENND6BQ8NEG7 585 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 NLGN4YQ8NFZ3 816 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-209ENST00000547018 OR8D4Q8NGM9 314 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 FLVCR1-AS1Q8TAF5 88 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 APOBEC4Q8WW27 367 aaKnown RBP11.85□□□□□ -0.51
SCAF11-209ENST00000547018 SLC41A3Q96GZ6 507 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 MS4A4EQ96PG1 132 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 UBE2ZQ9H832 354 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-209ENST00000547018 GPN2Q9H9Y4 310 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-209ENST00000547018 TBC1D17Q9HA65 648 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 CHCHD3Q9NX63 227 aaKnown RBP11.85□□□□□ -0.51
SCAF11-209ENST00000547018 DTX4Q9Y2E6 619 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 WBP11Q9Y2W2 641 aaKnown RBP11.85□□□□□ -0.51
SCAF11-209ENST00000547018 SLC22A7Q9Y694 548 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 HSPE1-MOB4S4R3N1 261 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 SHISA7A6NL88 538 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 ARHGAP33O14559 1287 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 BMP4P12644 408 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 FRKP42685 505 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-209ENST00000547018 RGS6P49758 472 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 SMIM11AP58511 58 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 BNC1Q01954 994 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 TDGQ13569 410 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 FLYWCH1Q4VC44 716 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 DCST2Q5T1A1 773 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 ZNF836Q6ZNA1 936 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 C10orf53Q8N6V4 93 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 PIGXQ8TBF5 258 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 CNOT9Q92600 299 aaKnown RBP11.85□□□□□ -0.51
SCAF11-209ENST00000547018 EFHD2Q96C19 240 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-209ENST00000547018 CEP19Q96LK0 163 aa11.85□□□□□ -0.51
SCAF11-209ENST00000547018 PRRC1Q96M27 445 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms