RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ELAVL3Q14576 367 aaKnown RBP2.36□□□□□ -2.03
CCDC38-204ENST00000546816 CYP51A1Q16850 503 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 ASPHD2Q6ICH7 369 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 CXCL17Q6UXB2 119 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 PAQR9Q6ZVX9 377 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 HSD17B13Q7Z5P4 300 aaPredicted RBP2.36□□□□□ -2.03
CCDC38-204ENST00000546816 H1FOOQ8IZA3 346 aaPredicted RBP2.36□□□□□ -2.03
CCDC38-204ENST00000546816 CSNK1A1LQ8N752 337 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 DCAF4L2Q8NA75 395 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 ZNF397Q8NF99 534 aaPredicted RBP2.36□□□□□ -2.03
CCDC38-204ENST00000546816 ST7LQ8TDW4 575 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 CCDC43Q96MW1 224 aaKnown RBP2.36□□□□□ -2.03
CCDC38-204ENST00000546816 DEFB118Q96PH6 123 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 NICN1Q9BSH3 213 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 WRAP53Q9BUR4 548 aaKnown RBP2.36□□□□□ -2.03
CCDC38-204ENST00000546816 CARD6Q9BX69 1037 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 ABCG4Q9H172 646 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 GLIPR2Q9H4G4 154 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 NTN4Q9HB63 628 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 DAZ3Q9NR90 486 aaKnown RBP2.36□□□□□ -2.03
CCDC38-204ENST00000546816 CYP39A1Q9NYL5 469 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 COPS7AQ9UBW8 275 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 FAM153AQ9UHL3 310 aa2.36□□□□□ -2.03
CCDC38-204ENST00000546816 TLR4O00206 839 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 TM9SF1O15321 606 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 CABYRO75952 493 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 CXCL10P02778 98 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 ABHD2P08910 425 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 HNRNPA2B1P22626 353 aaKnown RBP2.35□□□□□ -2.03
CCDC38-204ENST00000546816 GABRR1P24046 479 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 NF2P35240 595 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 HNRNPFP52597 415 aaKnown RBP2.35□□□□□ -2.03
CCDC38-204ENST00000546816 NLRP11P59045 1033 aaKnown RBP2.35□□□□□ -2.03
CCDC38-204ENST00000546816 RPA4Q13156 261 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 RAB35Q15286 201 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 LRIT3Q3SXY7 679 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 EOGTQ5NDL2 527 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 FAM159AQ6UWV7 190 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 FRA10AC1Q70Z53 315 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 BNIPLQ7Z465 357 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 NET1Q7Z628 596 aaPredicted RBP2.35□□□□□ -2.03
CCDC38-204ENST00000546816 AMZ2Q86W34 360 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 ZNF561Q8N587 486 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 LRRC17Q8N6Y2 441 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 DTD2Q96FN9 168 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 DDX47Q9H0S4 455 aaKnown RBP2.35□□□□□ -2.03
CCDC38-204ENST00000546816 GLT8D2Q9H1C3 349 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 PTGES2Q9H7Z7 377 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 DCAF13Q9NV06 445 aaKnown RBP2.35□□□□□ -2.03
CCDC38-204ENST00000546816 BCAP29Q9UHQ4 241 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 FZR1Q9UM11 496 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 SMC3Q9UQE7 1217 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 TDRKHQ9Y2W6 561 aaKnown RBP2.35□□□□□ -2.03
CCDC38-204ENST00000546816 PRG3Q9Y2Y8 225 aaPredicted RBP2.35□□□□□ -2.03
CCDC38-204ENST00000546816 EXOSC1Q9Y3B2 195 aaKnown RBP2.35□□□□□ -2.03
CCDC38-204ENST00000546816 DHX29Q7Z478 1369 aaKnown RBP2.35□□□□□ -2.03
CCDC38-204ENST00000546816 ANKRD30BQ9BXX2 1392 aa2.35□□□□□ -2.03
CCDC38-204ENST00000546816 ARHGAP21Q5T5U3 1957 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 A0A1B0GUA9 196 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 USP27XA6NNY8 438 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 E9PMD0 336 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 SGK494L7N484 410 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 SNAI2O43623 268 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 KINO60870 393 aaKnown RBP2.34□□□□□ -2.03
CCDC38-204ENST00000546816 LYPLA1O75608 230 aaPredicted RBP2.34□□□□□ -2.03
CCDC38-204ENST00000546816 NDUFA7O95182 113 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 STSP08842 583 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 RPS6P62753 249 aaKnown RBP2.34□□□□□ -2.03
CCDC38-204ENST00000546816 GALK2Q01415 458 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 TLE4Q04727 773 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 EGFEM1PQ0D2K5 195 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 ZP4Q12836 540 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 ZNF630Q2M218 657 aaPredicted RBP2.34□□□□□ -2.03
CCDC38-204ENST00000546816 CMPK2Q5EBM0 449 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 IL23RQ5VWK5 629 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 OR5M10Q6IEU7 315 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 Q7L0L9 218 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 PARGQ86W56 976 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 PPP1R27Q86WC6 154 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 TICAM2Q86XR7 235 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 CENPSQ8N2Z9 138 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 ZNF721Q8TF20 911 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 ZNF560Q96MR9 790 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 NOL4LQ96MY1 436 aaPredicted RBP2.34□□□□□ -2.03
CCDC38-204ENST00000546816 SMIM14Q96QK8 99 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 CNPY3Q9BT09 278 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 ABCG8Q9H221 673 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 FAM114A2Q9NRY5 505 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 ONECUT1Q9UBC0 465 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 EIF3LQ9Y262 564 aaKnown RBP2.34□□□□□ -2.03
CCDC38-204ENST00000546816 PPIAL4AQ9Y536 164 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 FKBP7Q9Y680 259 aa2.34□□□□□ -2.03
CCDC38-204ENST00000546816 PTCH1Q13635 1447 aa2.34□□□□□ -2.04
CCDC38-204ENST00000546816 CCDC69A6NI79 296 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 H3BTX0 84 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 BCKDHAP12694 445 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 GNSP15586 552 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 HOXD10P28358 340 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 COPB2P35606 906 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 OTUD4Q01804 1114 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms