RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 OR52E1Q8NGJ3 308 aa14.28□□□□□ -0.12
CNN3-207ENST00000545882 TMEM255BQ8WV15 326 aa14.28□□□□□ -0.12
CNN3-207ENST00000545882 DNAJA4Q8WW22 397 aaPredicted RBP14.28□□□□□ -0.12
CNN3-207ENST00000545882 ACOT11Q8WXI4 607 aaPredicted RBP14.28□□□□□ -0.12
CNN3-207ENST00000545882 KAT2AQ92830 837 aa14.28□□□□□ -0.12
CNN3-207ENST00000545882 OSTF1Q92882 214 aa14.28□□□□□ -0.12
CNN3-207ENST00000545882 GIMAP4Q9NUV9 329 aa14.28□□□□□ -0.12
CNN3-207ENST00000545882 RBFOX1Q9NWB1 397 aaKnown RBP14.28□□□□□ -0.12
CNN3-207ENST00000545882 SPHK1Q9NYA1 384 aa14.28□□□□□ -0.12
CNN3-207ENST00000545882 IL20RAQ9UHF4 553 aa14.28□□□□□ -0.12
CNN3-207ENST00000545882 RWDD3Q9Y3V2 267 aa14.28□□□□□ -0.12
CNN3-207ENST00000545882 PCDHGB7Q9Y5F8 929 aa14.28□□□□□ -0.12
CNN3-207ENST00000545882 MAU2Q9Y6X3 613 aa14.28□□□□□ -0.12
CNN3-207ENST00000545882 KIAA0100Q14667 2235 aaKnown RBP14.28□□□□□ -0.12
CNN3-207ENST00000545882 C2orf92A0A1B0GVN3 265 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 PRR19A6NJB7 356 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 CD8B2A6NJW9 211 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 OR52A4PA6NMU1 304 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 CDC42EP2O14613 210 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 PCDH8O95206 1070 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 NFATC1O95644 943 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 YES1P07947 543 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 CD8BP10966 210 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 PRKAR1BP31321 381 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 SNRPNP63162 240 aaKnown RBP14.27□□□□□ -0.12
CNN3-207ENST00000545882 DSG2Q14126 1118 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 THOC7Q6I9Y2 204 aaKnown RBP14.27□□□□□ -0.12
CNN3-207ENST00000545882 HEPHL1Q6MZM0 1159 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 ZNF620Q6ZNG0 422 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 NR2C2APQ86WQ0 139 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 KLHL36Q8N4N3 616 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 RAB42Q8N4Z0 105 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 SIRT6Q8N6T7 355 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 NEIL3Q8TAT5 605 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 RFKQ969G6 155 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 TMEM43Q9BTV4 400 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 HINT3Q9NQE9 182 aaKnown RBP14.27□□□□□ -0.12
CNN3-207ENST00000545882 ALG5Q9Y673 324 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 CSNK1G3Q9Y6M4 447 aa14.27□□□□□ -0.12
CNN3-207ENST00000545882 MID1O15344 667 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 HLA-DPB1P04440 258 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 HTR1FP30939 366 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 AHRP35869 848 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 ERVK-21P61565 698 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 EFR3AQ14156 821 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 TATDN3Q17R31 274 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 FAM111BQ6SJ93 734 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 FRRS1Q6ZNA5 592 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 MBOAT2Q6ZWT7 520 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 RRM2BQ7LG56 351 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 GJD3Q8N144 294 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 OR2L3Q8NG85 312 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 OR52N1Q8NH53 320 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 PHOSPHO2Q8TCD6 241 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 ZFPM2Q8WW38 1151 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 SLC41A3Q96GZ6 507 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 RIPOR3Q96MK2 946 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 MCHR1Q99705 422 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 KCNJ15Q99712 375 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 TIMP4Q99727 224 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 COQ7Q99807 217 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 SARGQ9BW04 601 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 JAM3Q9BX67 310 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 PRRG3Q9BZD7 231 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 BTBD1Q9H0C5 482 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 SLA2Q9H6Q3 261 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 ISG20L2Q9H9L3 353 aaKnown RBP14.27□□□□□ -0.13
CNN3-207ENST00000545882 MED17Q9NVC6 651 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 ASB6Q9NWX5 421 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 SERGEFQ9UGK8 458 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 SLC13A4Q9UKG4 626 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 CLCA3PQ9Y6N3 262 aa14.27□□□□□ -0.13
CNN3-207ENST00000545882 AKAP8O43823 692 aaKnown RBP14.26□□□□□ -0.13
CNN3-207ENST00000545882 ZGLP1P0C6A0 271 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 PTNP21246 168 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 PTBP1P26599 531 aaKnown RBP eCLIP14.26□□□□□ -0.13
CNN3-207ENST00000545882 MPIP34949 423 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 RGS8P57771 180 aaPredicted RBP14.26□□□□□ -0.13
CNN3-207ENST00000545882 IL18Q14116 193 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 AGERQ15109 404 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 C2orf27AQ580R0 203 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 SNAP47Q5SQN1 464 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 TRIQKQ629K1 86 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 PSRC1Q6PGN9 363 aaPredicted RBP14.26□□□□□ -0.13
CNN3-207ENST00000545882 ZNF322Q6U7Q0 402 aaPredicted RBP14.26□□□□□ -0.13
CNN3-207ENST00000545882 PLET1Q6UQ28 207 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 B3GLCTQ6Y288 498 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 PLEKHM3Q6ZWE6 761 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 DGLUCYQ7Z3D6 616 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 KLBQ86Z14 1044 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 LIX1LQ8IVB5 337 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 TCTE3Q8IZS6 198 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 C12orf76Q8N812 135 aaPredicted RBP14.26□□□□□ -0.13
CNN3-207ENST00000545882 YIPF7Q8N8F6 280 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 C19orf18Q8NEA5 215 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 CHFRQ96EP1 664 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 SAMD8Q96LT4 415 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 C10orf90Q96M02 699 aa14.26□□□□□ -0.13
CNN3-207ENST00000545882 SECISBP2Q96T21 854 aaKnown RBP14.26□□□□□ -0.13
CNN3-207ENST00000545882 ACTRT3Q9BYD9 372 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms