RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 ADAP2Q9NPF8 381 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 WASH6PQ9NQA3 447 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 HINT3Q9NQE9 182 aaKnown RBP14.07□□□□□ -0.16
USP28-214ENST00000545540 C20orf141Q9NUB4 165 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 VPS13AQ96RL7 3174 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 SLC9A3R1O14745 358 aaPredicted RBP14.07□□□□□ -0.16
USP28-214ENST00000545540 ALPPP05187 535 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 KHKP50053 298 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 SMIM11AP58511 58 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 TANGO2Q6ICL3 276 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 ABHD17CQ6PCB6 329 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 PLET1Q6UQ28 207 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 VITQ6UXI7 678 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 YIPF7Q8N8F6 280 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 BMPERQ8N8U9 685 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 OR7G2Q8NG99 324 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 OR13C5Q8NGS8 318 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 IGFLR1Q9H665 355 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 RNF121Q9H920 327 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 GALNT9Q9HCQ5 603 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 CD93Q9NPY3 652 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 GIMAP4Q9NUV9 329 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 PTGFRNQ9P2B2 879 aa14.07□□□□□ -0.16
USP28-214ENST00000545540 A0A0G2JMP0 313 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 A0A0X1KG70 313 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 FAM240BA0A1B0GVZ2 78 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 E9PI62 339 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 GABRPO00591 440 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 LDB3O75112 727 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 CHRNB1P11230 501 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 INPP1P49441 399 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 TJAP1Q5JTD0 557 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 FIGNL1Q6PIW4 674 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 TMIEQ8NEW7 156 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 OR4M2Q8NGB6 313 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 OR51A7Q8NH64 312 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 ADAMTS15Q8TE58 950 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 FGF13Q92913 245 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 HDHD2Q9H0R4 259 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 BEX1Q9HBH7 125 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 KLHL1Q9NR64 748 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 ARHGEF17Q96PE2 2063 aaPredicted RBP14.06□□□□□ -0.16
USP28-214ENST00000545540 IQCMA0A1B0GVH7 501 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 PRKNO60260 465 aaPredicted RBP14.06□□□□□ -0.16
USP28-214ENST00000545540 IL1AP01583 271 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 SYPP08247 313 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 PEBP1P30086 187 aaKnown RBP14.06□□□□□ -0.16
USP28-214ENST00000545540 ACVR1BP36896 505 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 SRP9P49458 86 aaKnown RBP14.06□□□□□ -0.16
USP28-214ENST00000545540 SLC3A1Q07837 685 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 KLHL22Q53GT1 634 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 TRMT12Q53H54 448 aaKnown RBP14.06□□□□□ -0.16
USP28-214ENST00000545540 ARL9Q6T311 187 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 ORAI1Q96D31 301 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 ELP4Q96EB1 424 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 SLC38A2Q96QD8 506 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 FAIM2Q9BWQ8 316 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 TRAPPC4Q9Y296 219 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 SEC16AO15027 2179 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 BRWD1Q9NSI6 2320 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 FRKP42685 505 aaPredicted RBP14.06□□□□□ -0.16
USP28-214ENST00000545540 GCGRP47871 477 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 RAB28P51157 221 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 ZNF155Q12901 538 aaPredicted RBP14.06□□□□□ -0.16
USP28-214ENST00000545540 QPRTQ15274 297 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 DNAJC5GQ8N7S2 189 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 TMEM99Q8N816 258 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 OR10H4Q8NGA5 316 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 OR10G6Q8NH81 332 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 LILRB4Q8NHJ6 448 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 PCNPQ8WW12 178 aaKnown RBP14.06□□□□□ -0.16
USP28-214ENST00000545540 BADQ92934 168 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 PELI2Q9HAT8 420 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 ACSS1Q9NUB1 689 aaPredicted RBP14.06□□□□□ -0.16
USP28-214ENST00000545540 NDOR1Q9UHB4 597 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 GSTK1Q9Y2Q3 226 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 ALG5Q9Y673 324 aa14.06□□□□□ -0.16
USP28-214ENST00000545540 C12orf71A8MTZ7 269 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 GTPBP1O00178 669 aaKnown RBP14.05□□□□□ -0.16
USP28-214ENST00000545540 CSNK2A2P19784 350 aaPredicted RBP14.05□□□□□ -0.16
USP28-214ENST00000545540 ENDOUP21128 410 aaKnown RBP14.05□□□□□ -0.16
USP28-214ENST00000545540 SHC1P29353 583 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 OMPP47874 163 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 MAPK14Q16539 360 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 KIAA1211LQ6NV74 962 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 XKRXQ6PP77 449 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 PRSS41Q7RTY9 318 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 GDF7Q7Z4P5 450 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 RASSF5Q8WWW0 418 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 UPRTQ96BW1 309 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 ARHGAP9Q9BRR9 750 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 MOV10Q9HCE1 1003 aaKnown RBP14.05□□□□□ -0.16
USP28-214ENST00000545540 TRPV5Q9NQA5 729 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 STARD5Q9NSY2 213 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 H2AFY2Q9P0M6 372 aaPredicted RBP14.05□□□□□ -0.16
USP28-214ENST00000545540 USP36Q9P275 1121 aaKnown RBP14.05□□□□□ -0.16
USP28-214ENST00000545540 GRIP1Q9Y3R0 1128 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 TRAV6A0A075B6T7 132 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 PEX12O00623 359 aa14.05□□□□□ -0.16
USP28-214ENST00000545540 ZNF888P0CJ79 500 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms