RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 PRR5P85299 388 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 STX5Q13190 355 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 TP53BP2Q13625 1128 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 PCLAFQ15004 111 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 DAZAP2Q15038 168 aaPredicted RBP6.49□□□□□ -1.37
NUP43-206ENST00000543637 KIAA0040Q15053 153 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 FBXL19-AS1Q494R0 122 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 ATP6AP1LQ52LC2 224 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 RFTN2Q52LD8 501 aaPredicted RBP6.49□□□□□ -1.37
NUP43-206ENST00000543637 DCST1Q5T197 706 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 FAM219BQ5XKK7 198 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 PPP4R4Q6NUP7 873 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 NPSR1Q6W5P4 371 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 RNF165Q6ZSG1 346 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 ZNF551Q7Z340 670 aaPredicted RBP6.49□□□□□ -1.37
NUP43-206ENST00000543637 CAMKMTQ7Z624 323 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 LUZP2Q86TE4 346 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 MARCH3Q86UD3 253 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 TRABD2AQ86V40 505 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 NUDCD3Q8IVD9 361 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 BANPQ8N9N5 519 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 C9orf106Q8NAJ2 232 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 RELL2Q8NC24 303 aaPredicted RBP6.49□□□□□ -1.37
NUP43-206ENST00000543637 NAXEQ8NCW5 288 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 OR2M3Q8NG83 312 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 LINC01560Q8TB33 94 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 TCP10LQ8TDR4 215 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 TWIST2Q8WVJ9 160 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 NINJ1Q92982 152 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 TSSK3Q96PN8 268 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 HS3ST6Q96QI5 342 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 SH3GL2Q99962 352 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 GPATCH1Q9BRR8 931 aaKnown RBP6.49□□□□□ -1.37
NUP43-206ENST00000543637 SLC39A3Q9BRY0 314 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 LMF2Q9BU23 707 aaKnown RBP6.49□□□□□ -1.37
NUP43-206ENST00000543637 G6PC3Q9BUM1 346 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 CLEC4MQ9H2X3 399 aaPredicted RBP6.49□□□□□ -1.37
NUP43-206ENST00000543637 L2HGDHQ9H9P8 463 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 FANCFQ9NPI8 374 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 RASSF1Q9NS23 344 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 ACSS1Q9NUB1 689 aaPredicted RBP6.49□□□□□ -1.37
NUP43-206ENST00000543637 FAM120CQ9NX05 1096 aaKnown RBP6.49□□□□□ -1.37
NUP43-206ENST00000543637 PAQR5Q9NXK6 330 aaPredicted RBP6.49□□□□□ -1.37
NUP43-206ENST00000543637 CRIM1Q9NZV1 1036 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 BAIAP2L1Q9UHR4 511 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 FBXL2Q9UKC9 423 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 EIF3LQ9Y262 564 aaKnown RBP6.49□□□□□ -1.37
NUP43-206ENST00000543637 ZNF337Q9Y3M9 751 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 AP4B1Q9Y6B7 739 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 MED12LQ86YW9 2145 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 DOPEY1Q5JWR5 2465 aa6.49□□□□□ -1.37
NUP43-206ENST00000543637 SLC22A20A6NK97 555 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 KDM4EB2RXH2 506 aaPredicted RBP6.48□□□□□ -1.37
NUP43-206ENST00000543637 SCDO00767 359 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 SEC14L5O43304 696 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 LYPLA1O75608 230 aaPredicted RBP6.48□□□□□ -1.37
NUP43-206ENST00000543637 NKX2-2O95096 273 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 SLU7O95391 586 aaKnown RBP6.48□□□□□ -1.37
NUP43-206ENST00000543637 UTS2O95399 124 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 SYNGR4O95473 234 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 PLGP00747 810 aaPredicted RBP6.48□□□□□ -1.37
NUP43-206ENST00000543637 KRT16P08779 473 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 NUDT17P0C025 328 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 MYZAPP0CAP1 466 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 ZNF708P17019 499 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 SDC1P18827 310 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 ATP6V1C1P21283 382 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 TBXA2RP21731 343 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 LCN1P31025 176 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 DNAJA1P31689 397 aaKnown RBP6.48□□□□□ -1.37
NUP43-206ENST00000543637 LHX2P50458 406 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 ZNF41P51814 821 aaPredicted RBP6.48□□□□□ -1.37
NUP43-206ENST00000543637 IST1P53990 364 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 GAS1P54826 345 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 CLDN18P56856 261 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 PPP2R2AP63151 447 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 POU6F2P78424 691 aaPredicted RBP6.48□□□□□ -1.37
NUP43-206ENST00000543637 SORDQ00796 357 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 FGFBP1Q14512 234 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 MLC1Q15049 377 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 PRSS53Q2L4Q9 553 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 SPDYE7PQ495Y7 208 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 ARL13AQ5H913 290 aaPredicted RBP6.48□□□□□ -1.37
NUP43-206ENST00000543637 CPTPQ5TA50 214 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 KANK2Q63ZY3 851 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 GTF2IRD2BQ6EKJ0 949 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 ANKRD26P1Q6NSI1 321 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 EMBQ6PCB8 327 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 BHLHB9Q6PI77 547 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 SPNS3Q6ZMD2 512 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 CROCCP2Q86T23 111 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 GTF2IRD2Q86UP8 949 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 EXOC3L1Q86VI1 746 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 CDC20BQ86Y33 519 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 MISPQ8IVT2 679 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 KIRREL3Q8IZU9 778 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 CNEP1R1Q8N9A8 125 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 FADS6Q8N9I5 356 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 FNDC5Q8NAU1 212 aa6.48□□□□□ -1.37
NUP43-206ENST00000543637 ZNF527Q8NB42 609 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms