RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 NT5CQ8TCD5 201 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 CAPSLQ8WWF8 208 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 SCARF2Q96GP6 870 aaPredicted RBP12.6□□□□□ -0.39
PPME1-208ENST00000543525 OR2M4Q96R27 311 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 IL20Q9NYY1 176 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 NTMQ9P121 344 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 RBMX2Q9Y388 322 aaKnown RBP12.6□□□□□ -0.39
PPME1-208ENST00000543525 CHST2Q9Y4C5 530 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 MYO7AQ13402 2215 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 TTC28Q96AY4 2481 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 TMEM265A0A087WTH1 108 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 CCDC182A6NF36 153 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 A8MU76 341 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 POLR1CO15160 346 aaPredicted RBP12.6□□□□□ -0.39
PPME1-208ENST00000543525 KLF4O43474 513 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 PLRG1O43660 514 aaKnown RBP12.6□□□□□ -0.39
PPME1-208ENST00000543525 AKAP8O43823 692 aaKnown RBP12.6□□□□□ -0.39
PPME1-208ENST00000543525 ZNF888P0CJ79 500 aaPredicted RBP12.6□□□□□ -0.39
PPME1-208ENST00000543525 TRAPPC2P0DI81 140 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 TRAPPC2BP0DI82 140 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 GAAP10253 952 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 CPN2P22792 545 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 HTR1FP30939 366 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 NKX2-5P52952 324 aaPredicted RBP12.6□□□□□ -0.39
PPME1-208ENST00000543525 DAB2P98082 770 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 FABP5Q01469 135 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 TNFRSF17Q02223 184 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 ACSM1Q08AH1 577 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 TAB1Q15750 504 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 PUS10Q3MIT2 529 aaKnown RBP12.6□□□□□ -0.39
PPME1-208ENST00000543525 EIPR1Q53HC9 387 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 ZNF628Q5EBL2 1059 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 C9orf50Q5SZB4 431 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 SLC30A6Q6NXT4 461 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 FRRS1Q6ZNA5 592 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 LHFPL3Q86UP9 236 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 CAMKK1Q8N5S9 505 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 ZNF485Q8NCK3 441 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 PSD4Q8NDX1 1056 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 OR4E2Q8NGC2 313 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 OR6F1Q8NGZ6 308 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 JPH3Q8WXH2 748 aaPredicted RBP12.6□□□□□ -0.39
PPME1-208ENST00000543525 C10orf90Q96M02 699 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 TM9SF2Q99805 663 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 OR2B2Q9GZK3 357 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 MTIF3Q9H2K0 278 aaKnown RBP12.6□□□□□ -0.39
PPME1-208ENST00000543525 CDH10Q9Y6N8 788 aa12.6□□□□□ -0.39
PPME1-208ENST00000543525 LINC00854A0A1B0GVQ3 168 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 HMX3A6NHT5 357 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 CASKO14936 926 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 SEC14L5O43304 696 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 IDH3BO43837 385 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 CH25HO95992 272 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 HLA-DPB1P04440 258 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 CSF3P09919 207 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 DDOSTP39656 456 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 GPR4P46093 362 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 HOXC5Q00444 222 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 ARHGAP11BQ3KRB8 267 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 ATAD3CQ5T2N8 411 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 NXNL2Q5VZ03 156 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 ZNF620Q6ZNG0 422 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 VN1R4Q7Z5H5 301 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 NRMQ8IXM6 262 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 KCT2Q8NC54 265 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 OR7G2Q8NG99 324 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 OR4K14Q8NGD5 310 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 OR52N1Q8NH53 320 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 CDS1Q92903 461 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 SLC22A18Q96BI1 424 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 PLA2G2FQ9BZM2 168 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 SYNDIG1Q9H7V2 258 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 SYNPO2LQ9H987 977 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 POLMQ9NP87 494 aaPredicted RBP12.59□□□□□ -0.39
PPME1-208ENST00000543525 NTNG1Q9Y2I2 539 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 WDR45Q9Y484 360 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 CKAP5Q14008 2032 aa12.59□□□□□ -0.39
PPME1-208ENST00000543525 MEIOCA2RUB1 952 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 FCMRO60667 390 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 ZIC2O95409 532 aaPredicted RBP12.58□□□□□ -0.39
PPME1-208ENST00000543525 NTN1O95631 604 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 NDUFV2P19404 249 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 ATP6V1E1P36543 226 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 SUZ12Q15022 739 aaKnown RBP12.58□□□□□ -0.39
PPME1-208ENST00000543525 ITPRIPL2Q3MIP1 535 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 LCN1P1Q5VSP4 162 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 MZT2AQ6P582 158 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 FAM111BQ6SJ93 734 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 METAP1DQ6UB28 335 aaPredicted RBP12.58□□□□□ -0.39
PPME1-208ENST00000543525 ZNF836Q6ZNA1 936 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 MARCH9Q86YJ5 346 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 ZFP41Q8N8Y5 198 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 SYT14Q8NB59 555 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 SLC16A11Q8NCK7 471 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 OR2T33Q8NG76 320 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 OR4F15Q8NGB8 312 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 COL26A1Q96A83 441 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 SERINC2Q96SA4 455 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 PHOX2BQ99453 314 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 JAM3Q9BX67 310 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms