RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 OR2B2Q9GZK3 357 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 ATG10Q9H0Y0 220 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 OR51V1Q9H2C8 321 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 RIMS4Q9H426 269 aaPredicted RBP2.84□□□□□ -1.95
USP28-210ENST00000542033 ZDHHC6Q9H6R6 413 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 RNF121Q9H920 327 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 CAB39LQ9H9S4 337 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 SPACA1Q9HBV2 294 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 RAVER2Q9HCJ3 691 aaKnown RBP2.84□□□□□ -1.95
USP28-210ENST00000542033 RAB9BQ9NP90 201 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 PHPT1Q9NRX4 125 aaPredicted RBP2.84□□□□□ -1.95
USP28-210ENST00000542033 FAM114A2Q9NRY5 505 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 EXD2Q9NVH0 621 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 VPS54Q9P1Q0 977 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 UXTQ9UBK9 157 aaPredicted RBP2.84□□□□□ -1.95
USP28-210ENST00000542033 C19orf25Q9UFG5 118 aaPredicted RBP2.84□□□□□ -1.95
USP28-210ENST00000542033 SLC12A6Q9UHW9 1150 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 ENOPH1Q9UHY7 261 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 LNPEPQ9UIQ6 1025 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 GNPTGQ9UJJ9 305 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 DIMT1Q9UNQ2 313 aaKnown RBP2.84□□□□□ -1.95
USP28-210ENST00000542033 GINS2Q9Y248 185 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 PLEKHA6Q9Y2H5 1048 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 SAMHD1Q9Y3Z3 626 aaKnown RBP2.84□□□□□ -1.95
USP28-210ENST00000542033 MAD1L1Q9Y6D9 718 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 USH1CQ9Y6N9 552 aa2.84□□□□□ -1.95
USP28-210ENST00000542033 FAM205AQ6ZU69 1335 aa2.84□□□□□ -1.96
USP28-210ENST00000542033 KIF26BQ2KJY2 2108 aa2.84□□□□□ -1.96
USP28-210ENST00000542033 ABCC12Q96J65 1359 aa2.84□□□□□ -1.96
USP28-210ENST00000542033 AKAP12Q02952 1782 aa2.84□□□□□ -1.96
USP28-210ENST00000542033 KDM6AO15550 1401 aaPredicted RBP2.84□□□□□ -1.96
USP28-210ENST00000542033 RALGAPBQ86X10 1494 aa2.84□□□□□ -1.96
USP28-210ENST00000542033 CDC42BPAQ5VT25 1732 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 NCF1BA6NI72 391 aaPredicted RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 ZNF98A6NK75 572 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 USP27XA6NNY8 438 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 NCF1CA8MVU1 366 aaPredicted RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 KPNA7A9QM74 516 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 C2CD4DB7Z1M9 353 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ATP6V1G2-DDX39BF2Z307 99 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ZNF701M0R085 212 aaPredicted RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 M0R296 226 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 SLC28A1O00337 649 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 NTN3O00634 580 aaPredicted RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 TOR1AO14656 332 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 AQP9O43315 295 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 GRAP2O75791 330 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 OR6B1O95007 311 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 SEMA3DO95025 777 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 DHFRP00374 187 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 PDGFBP01127 241 aaPredicted RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 CALB1P05937 261 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 GPIP06744 558 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 OCM2P0CE71 109 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 OCMP0CE72 109 aaPredicted RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 CEBPBP17676 345 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 UGT1A6P19224 532 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 GALP22466 123 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 GLRA2P23416 452 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 RPA1P27694 616 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ADSSP30520 456 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 MAT2AP31153 395 aaKnown RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 CHRNA3P32297 505 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 GTF2H1P32780 548 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 RFC2P35250 354 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 MDH1P40925 334 aaKnown RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 NKX2-1P43699 371 aaPredicted RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 NSFP46459 744 aaKnown RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 HCAR3P49019 387 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 NPY2RP49146 381 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 CNN1P51911 297 aaKnown RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 ARHGDIAP52565 204 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 HUNKP57058 714 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 NUP107P57740 925 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 SPCS3P61009 180 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 NAA20P61599 178 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 GUCY2DQ02846 1103 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ABRQ12979 859 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 PMS2P3Q13401 168 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 DDX39BQ13838 428 aaKnown RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 GCKRQ14397 625 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 TMEM187Q14656 261 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 OPCMLQ14982 345 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 KRT31Q15323 416 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ZMYND11Q15326 602 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 SGCAQ16586 387 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 DUSP7Q16829 419 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ZNF829Q3KNS6 432 aaPredicted RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 YIF1BQ5BJH7 314 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ADAMTSL4-AS1Q5T5F5 129 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 LIN9Q5TKA1 542 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ELP2Q6IA86 826 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 OR6B2Q6IFH4 312 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 PWWP2BQ6NUJ5 590 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 FBXL22Q6P050 247 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ZCCHC12Q6PEW1 402 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 BHLHB9Q6PI77 547 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 SIGLEC15Q6ZMC9 328 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 Q6ZSR9 355 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 TRMT10CQ7L0Y3 403 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms