RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 FLYWCH1Q4VC44 716 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 PIGGQ5H8A4 983 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 SPANXN4Q5MJ08 99 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 C1orf185Q5T7R7 199 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 WLSQ5T9L3 541 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 OR4F3Q6IEY1 312 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 TMEM107Q6UX40 140 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 TMEM64Q6YI46 380 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 C16orf47Q6ZP98 133 aaPredicted RBP7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 MSANTD1Q6ZTZ1 278 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 SLC22A16Q86VW1 577 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 OR2M7Q8NG81 312 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 DOK4Q8TEW6 326 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 C10orf82Q8WW14 230 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 ASB15Q8WXK1 588 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 ADIPOR1Q96A54 375 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 LRRC46Q96FV0 321 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 MARK4Q96L34 752 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 RILPQ96NA2 401 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 TTTY12Q9BZ98 90 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 NSRP1Q9H0G5 558 aaKnown RBP7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 RABEP2Q9H5N1 569 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 ZNF385DQ9H6B1 395 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 C3orf14Q9HBI5 128 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 SIRT3Q9NTG7 399 aaPredicted RBP7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 DDX18Q9NVP1 670 aaKnown RBP7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 BCAP29Q9UHQ4 241 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 BTNL2Q9UIR0 455 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 FAM215AQ9Y5M1 114 aa7.97□□□□□ -1.13
CLSTN3-212ENST00000541770 ZNF469Q96JG9 3925 aaPredicted RBP7.96□□□□□ -1.13
CLSTN3-212ENST00000541770 NCKAP5O14513 1909 aa7.96□□□□□ -1.13
CLSTN3-212ENST00000541770 A0A0G2JMM0 328 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 C2orf92A0A1B0GVN3 265 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 A0A1W2PPB8 328 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 A0A1W2PRS3 328 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 OR14I1A6ND48 311 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 TTC36A6NLP5 189 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 KIR3DP1A8MWS1 328 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 ACOX3O15254 700 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 EMC8O43402 210 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 OR2J2O76002 312 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 C6orf47O95873 294 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 NCF2P19878 526 aaPredicted RBP7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 DRD4P21917 467 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 DRD5P21918 477 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 GPC1P35052 558 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 PPICP45877 212 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 CDK9P50750 372 aaKnown RBP7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 POLR2JP52435 117 aaKnown RBP7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 SEC24CP53992 1094 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 HBA1P69905 142 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 RCAN2Q14206 197 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 HLA-DQA1Q5Y7H0 255 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 RTL6Q6ICC9 239 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 ZCCHC12Q6PEW1 402 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 OPN5Q6U736 354 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 PRIMA1Q86XR5 153 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 GPALPP1Q8IXQ4 340 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 DND1Q8IYX4 353 aaKnown RBP7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 SIMC1Q8NDZ2 872 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 NUP43Q8NFH3 380 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 OR9I1Q8NGQ6 314 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 SLC22A8Q8TCC7 542 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 SFXN5Q8TD22 340 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 HOXB13Q92826 284 aaPredicted RBP7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 MOAP1Q96BY2 351 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 MBD6Q96DN6 1003 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 FAM120BQ96EK7 910 aaKnown RBP7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 VSTM2LQ96N03 204 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 CCDC115Q96NT0 180 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 BTBD9Q96Q07 612 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 RASL10BQ96S79 203 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 ANKRA2Q9H9E1 313 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 CBLCQ9ULV8 474 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 PCDHGB4Q9UN71 923 aa7.96□□□□□ -1.14
CLSTN3-212ENST00000541770 SPG11Q96JI7 2443 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 DNAJC13O75165 2243 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 ANKHD1Q8IWZ3 2542 aaKnown RBP7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 FBN3Q75N90 2809 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 FRG2CA6NGY1 282 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 C9JVG2 144 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 WWP2O00308 870 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 TO15178 435 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 CFLARO15519 480 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 SNX3O60493 162 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 WDR1O75083 606 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 ERN1O75460 977 aaKnown RBP7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 SOX30O94993 753 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 OR6B1O95007 311 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 ATE1O95260 518 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 LY6G6DO95868 133 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 HEXAP06865 529 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 CELA3AP09093 270 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 CT45A8P0DMV1 189 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 CT45A9P0DMV2 189 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 NAGAP17050 411 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 EFNA1P20827 205 aaPredicted RBP7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 BMP5P22003 454 aa7.95□□□□□ -1.14
CLSTN3-212ENST00000541770 PEX19P40855 299 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms