RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SLITRK5O94991 958 aa24.04■■□□□ 1.44
CHFR-218ENST00000540963 MPIP34949 423 aa24.04■■□□□ 1.44
CHFR-218ENST00000540963 CLK3P49761 638 aaKnown RBP24.04■■□□□ 1.44
CHFR-218ENST00000540963 HEPACAMQ14CZ8 416 aa24.04■■□□□ 1.44
CHFR-218ENST00000540963 SGCBQ16585 318 aa24.04■■□□□ 1.44
CHFR-218ENST00000540963 EXOC3L2Q2M3D2 409 aa24.04■■□□□ 1.44
CHFR-218ENST00000540963 ADAM5Q6NVV9 412 aa24.04■■□□□ 1.44
CHFR-218ENST00000540963 PODNL1Q6PEZ8 512 aa24.04■■□□□ 1.44
CHFR-218ENST00000540963 FAM9CQ8IZT9 166 aa24.04■■□□□ 1.44
CHFR-218ENST00000540963 ZNF483Q8TF39 744 aaPredicted RBP24.04■■□□□ 1.44
CHFR-218ENST00000540963 SLC35C2Q9NQQ7 365 aa24.04■■□□□ 1.44
CHFR-218ENST00000540963 XPR1Q9UBH6 696 aa24.04■■□□□ 1.44
CHFR-218ENST00000540963 A0A087WV62 115 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 C17orf51A8MQB3 221 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 IFNA2P01563 188 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 IL3P08700 152 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 COL6A2P12110 1019 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 MAGEA12P43365 314 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 RPS4XP62701 263 aaKnown RBP24.03■■□□□ 1.44
CHFR-218ENST00000540963 CSTF3Q12996 717 aaKnown RBP24.03■■□□□ 1.44
CHFR-218ENST00000540963 TMEM44Q2T9K0 475 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 BEND4Q6ZU67 534 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 NOA1Q8NC60 698 aaKnown RBP24.03■■□□□ 1.44
CHFR-218ENST00000540963 OR7G2Q8NG99 324 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 PLPPR2Q96GM1 343 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 GLRX2Q9NS18 164 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 SENP1Q9P0U3 644 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 MRTO4Q9UKD2 239 aaKnown RBP24.03■■□□□ 1.44
CHFR-218ENST00000540963 GPR52Q9Y2T5 361 aa24.03■■□□□ 1.44
CHFR-218ENST00000540963 ANK3Q12955 4377 aaKnown RBP24.02■■□□□ 1.44
CHFR-218ENST00000540963 UQCRHLA0A096LP55 91 aa24.02■■□□□ 1.44
CHFR-218ENST00000540963 IGLV3-32A0A0A0MS00 114 aa24.02■■□□□ 1.44
CHFR-218ENST00000540963 TLX2O43763 284 aaPredicted RBP24.02■■□□□ 1.44
CHFR-218ENST00000540963 SS18L1O75177 396 aaPredicted RBP24.02■■□□□ 1.44
CHFR-218ENST00000540963 NME6O75414 186 aaPredicted RBP24.02■■□□□ 1.44
CHFR-218ENST00000540963 CTAGE8P0CG41 777 aa24.02■■□□□ 1.44
CHFR-218ENST00000540963 GSTM5P46439 218 aa24.02■■□□□ 1.44
CHFR-218ENST00000540963 CTBP2P56545 445 aa24.02■■□□□ 1.44
CHFR-218ENST00000540963 UAP1Q16222 522 aaPredicted RBP24.02■■□□□ 1.44
CHFR-218ENST00000540963 CLEC12BQ2HXU8 276 aa24.02■■□□□ 1.44
CHFR-218ENST00000540963 C8orf74Q6P047 294 aa24.02■■□□□ 1.44
CHFR-218ENST00000540963 CTAGE4Q8IX94 777 aa24.02■■□□□ 1.44
CHFR-218ENST00000540963 EXOSC8Q96B26 276 aaKnown RBP24.02■■□□□ 1.44
CHFR-218ENST00000540963 TRMT61AQ96FX7 289 aaKnown RBP24.02■■□□□ 1.44
CHFR-218ENST00000540963 FUT8Q9BYC5 575 aa24.02■■□□□ 1.44
CHFR-218ENST00000540963 PRRG4Q9BZD6 226 aa24.02■■□□□ 1.44
CHFR-218ENST00000540963 HHATLQ9HCP6 504 aa24.02■■□□□ 1.44
CHFR-218ENST00000540963 CR1P17927 2039 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 OVOL3O00110 214 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 PLGP00747 810 aaPredicted RBP24.01■■□□□ 1.43
CHFR-218ENST00000540963 PLAUP00749 431 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 KRT6AP02538 564 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 KRT6BP04259 564 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 ECHS1P30084 290 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 KRT6CP48668 564 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 DECR1Q16698 335 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 GGNQ86UU5 652 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 RELL1Q8IUW5 271 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 OR5M1Q8NGP8 315 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 DUSP19Q8WTR2 217 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 C16orf45Q96MC5 204 aaPredicted RBP24.01■■□□□ 1.43
CHFR-218ENST00000540963 MRPL57Q9BQC6 102 aaKnown RBP24.01■■□□□ 1.43
CHFR-218ENST00000540963 ZNF225Q9UK10 706 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 PRR14LQ5THK1 2151 aa24.01■■□□□ 1.43
CHFR-218ENST00000540963 RNF212BA8MTL3 300 aa24■■□□□ 1.43
CHFR-218ENST00000540963 PPP6CO00743 305 aa24■■□□□ 1.43
CHFR-218ENST00000540963 PCDH7O60245 1069 aa24■■□□□ 1.43
CHFR-218ENST00000540963 URI1O94763 535 aaPredicted RBP24■■□□□ 1.43
CHFR-218ENST00000540963 ZNF17P17021 662 aa24■■□□□ 1.43
CHFR-218ENST00000540963 PSMB1P20618 241 aaKnown RBP24■■□□□ 1.43
CHFR-218ENST00000540963 IDUAP35475 653 aa24■■□□□ 1.43
CHFR-218ENST00000540963 PSMD4P55036 377 aaKnown RBP24■■□□□ 1.43
CHFR-218ENST00000540963 C17orf67Q0P5P2 114 aa24■■□□□ 1.43
CHFR-218ENST00000540963 ZNF155Q12901 538 aaPredicted RBP24■■□□□ 1.43
CHFR-218ENST00000540963 VEZF1Q14119 521 aa24■■□□□ 1.43
CHFR-218ENST00000540963 CPEB4Q17RY0 729 aaKnown RBP eCLIP24■■□□□ 1.43
CHFR-218ENST00000540963 SPIN4Q56A73 249 aa24■■□□□ 1.43
CHFR-218ENST00000540963 HMBOX1Q6NT76 420 aa24■■□□□ 1.43
CHFR-218ENST00000540963 STK32CQ86UX6 486 aa24■■□□□ 1.43
CHFR-218ENST00000540963 MMGT1Q8N4V1 131 aa24■■□□□ 1.43
CHFR-218ENST00000540963 AKAP1Q92667 903 aaKnown RBP eCLIP24■■□□□ 1.43
CHFR-218ENST00000540963 RTN4RQ9BZR6 473 aa24■■□□□ 1.43
CHFR-218ENST00000540963 ACTR6Q9GZN1 396 aa24■■□□□ 1.43
CHFR-218ENST00000540963 ACSS3Q9H6R3 686 aa24■■□□□ 1.43
CHFR-218ENST00000540963 LAMP3Q9UQV4 416 aa24■■□□□ 1.43
CHFR-218ENST00000540963 GNG14A0A1W2PPG7 69 aa23.99■■□□□ 1.43
CHFR-218ENST00000540963 RNF223E7ERA6 249 aa23.99■■□□□ 1.43
CHFR-218ENST00000540963 IL33O95760 270 aa23.99■■□□□ 1.43
CHFR-218ENST00000540963 TP53P04637 393 aaPredicted RBP23.99■■□□□ 1.43
CHFR-218ENST00000540963 NID1P14543 1247 aa23.99■■□□□ 1.43
CHFR-218ENST00000540963 PHBP35232 272 aa23.99■■□□□ 1.43
CHFR-218ENST00000540963 CDH13P55290 713 aa23.99■■□□□ 1.43
CHFR-218ENST00000540963 RAE1P78406 368 aaKnown RBP23.99■■□□□ 1.43
CHFR-218ENST00000540963 CKAP4Q07065 602 aaKnown RBP23.99■■□□□ 1.43
CHFR-218ENST00000540963 STX5Q13190 355 aa23.99■■□□□ 1.43
CHFR-218ENST00000540963 GALNT18Q6P9A2 607 aa23.99■■□□□ 1.43
CHFR-218ENST00000540963 HIPK1Q86Z02 1210 aa23.99■■□□□ 1.43
CHFR-218ENST00000540963 HBEGFQ99075 208 aa23.99■■□□□ 1.43
CHFR-218ENST00000540963 REG4Q9BYZ8 158 aa23.99■■□□□ 1.43
CHFR-218ENST00000540963 MRPL46Q9H2W6 279 aaKnown RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms