RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 SFXN5Q8TD22 340 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 ADAMTS15Q8TE58 950 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 CDS1Q92903 461 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 MOAP1Q96BY2 351 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 NTNG2Q96CW9 530 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 THOC1Q96FV9 657 aaKnown RBP8.42□□□□□ -1.06
SNHG1-215ENST00000540904 CCDC120Q96HB5 630 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 PSMG3-AS1Q96PY0 264 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 OR52E6Q96RD3 313 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 STACQ99469 402 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 BTBD2Q9BX70 525 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 ACTRT3Q9BYD9 372 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 TBL1XR1Q9BZK7 514 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 UBQLN3Q9H347 655 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 PIGUQ9H490 435 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 TCF7L2Q9NQB0 619 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 DUSP22Q9NRW4 184 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 PNPLA3Q9NST1 481 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 GPATCH2Q9NW75 528 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 FAM120CQ9NX05 1096 aaKnown RBP8.42□□□□□ -1.06
SNHG1-215ENST00000540904 SPRR3Q9UBC9 169 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 FBXL2Q9UKC9 423 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 ABCG2Q9UNQ0 655 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 MEMO1Q9Y316 297 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 POLEQ07864 2286 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 C15orf38-AP3S2A0A0A6YYH1 394 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 E9PLN8 166 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 BCKDKO14874 412 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 POLR3GO15318 223 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-215ENST00000540904 FADS1O60427 444 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 CBR3O75828 277 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 HPNP05981 417 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 KRT16P08779 473 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 HPGDP15428 266 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 MATN1P21941 496 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 UQCRC2P22695 453 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 TCEA1P23193 301 aaKnown RBP8.41□□□□□ -1.06
SNHG1-215ENST00000540904 CLK3P49761 638 aaKnown RBP8.41□□□□□ -1.06
SNHG1-215ENST00000540904 GAS1P54826 345 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 CASP9P55211 416 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 POU6F2P78424 691 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-215ENST00000540904 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.41□□□□□ -1.06
SNHG1-215ENST00000540904 GRAMD1BQ3KR37 738 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 EIPR1Q53HC9 387 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 WIPI1Q5MNZ9 446 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-215ENST00000540904 EXOSC6Q5RKV6 272 aaKnown RBP8.41□□□□□ -1.06
SNHG1-215ENST00000540904 WLSQ5T9L3 541 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 MTFR2Q6P444 385 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 C6orf120Q7Z4R8 191 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 ZAR1Q86SH2 424 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 YRDCQ86U90 279 aaKnown RBP8.41□□□□□ -1.06
SNHG1-215ENST00000540904 MARCH3Q86UD3 253 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 EID3Q8N140 333 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 MIER2Q8N344 545 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 GLB1L3Q8NCI6 653 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-215ENST00000540904 FAM83FQ8NEG4 500 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-215ENST00000540904 OR4K17Q8NGC6 315 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 OR5D16Q8NGK9 328 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 OR14L1PQ8NHC6 308 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 FAM110BQ8TC76 370 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 RNF138Q8WVD3 245 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 SARAFQ96BY9 339 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 CCDC115Q96NT0 180 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 OR7D2Q96RA2 312 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 PANX1Q96RD7 426 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 VKORC1Q9BQB6 163 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 EBF4Q9BQW3 602 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 INPP5KQ9BT40 448 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 G6PC3Q9BUM1 346 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 RTN4RQ9BZR6 473 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 TP63Q9H3D4 680 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-215ENST00000540904 SDR39U1Q9NRG7 319 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-215ENST00000540904 SDHAF3Q9NRP4 125 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 FBXO34Q9NWN3 711 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 ALKBH4Q9NXW9 302 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 PPP4R1LQ9P1A2 415 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 SLC6A5Q9Y345 797 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 PCDHGB3Q9Y5G1 929 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 KCNE3Q9Y6H6 103 aa8.41□□□□□ -1.06
SNHG1-215ENST00000540904 FIGNL2A6NMB9 653 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 B4DXG7 233 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 ADAM10O14672 748 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 GMFGO60234 142 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 SOX30O94993 753 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 OXSR1O95747 527 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-215ENST00000540904 CLDN1O95832 211 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 IL6P05231 212 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 ATP6V1C1P21283 382 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 CHI3L1P36222 383 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-215ENST00000540904 CDKN2CP42773 168 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 STX1BP61266 288 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 ADORA2A-AS1P86434 159 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 EMC4Q5J8M3 183 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 DCST2Q5T1A1 773 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 TNFAIP8L2Q6P589 184 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-215ENST00000540904 APOOLQ6UXV4 268 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 RPTNQ6XPR3 784 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 ZNF621Q6ZSS3 439 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 RPRMLQ8N4K4 120 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 ARFGAP2Q8N6H7 521 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms