RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 KANSL1Q7Z3B3 1105 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 LAS2Q8IYD9 372 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 NAGSQ8N159 534 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 OR4A15Q8NGL6 344 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 OR6M1Q8NGM8 313 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 ZNF431Q8TF32 576 aaPredicted RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 C2orf15Q8WU43 125 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 GPR137Q96N19 417 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 FRG2BQ96QU4 278 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 MARVELD1Q9BSK0 173 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 FNDC11Q9BVV2 318 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 PIGUQ9H490 435 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 NMNAT1Q9HAN9 279 aaPredicted RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 IFT46Q9NQC8 304 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 ZCCHC3Q9NUD5 404 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 ZNF282Q9UDV7 671 aaPredicted RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 BTNL2Q9UIR0 455 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 RUVBL1Q9Y265 456 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 SLC22A14Q9Y267 594 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 AUP1Q9Y679 476 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 CACNA1AO00555 2505 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 C1orf226A1L170 272 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 FAM74A7A6NL05 159 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 SCAMP2O15127 329 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 KDELR3O43731 214 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 AKAP8O43823 692 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 PCDH7O60245 1069 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 HPGDSO60760 199 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 TRAPPC6AO75865 159 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 RNF224P0DH78 156 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 C8orf89P0DMQ9 161 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 FOSL1P15407 271 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 XCR1P46094 333 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 GSTM5P46439 218 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 GDI2P50395 445 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 RGS8P57771 180 aaPredicted RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 NNATQ16517 81 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 SGCAQ16586 387 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 GFOD2Q3B7J2 385 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 FAM74A3Q4VXF1 159 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 TMEM201Q5SNT2 666 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 NDUFAF5Q5TEU4 345 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 ANXA8L1Q5VT79 327 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 C1orf53Q5VUE5 145 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 BICRALQ6AI39 1079 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 C22orf39Q6P5X5 142 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 PAQR6Q6TCH4 344 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 METAP1DQ6UB28 335 aaPredicted RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 TEX261Q6UWH6 196 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 PDZD3Q86UT5 571 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 KIF18BQ86Y91 864 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 RNF175Q8N4F7 328 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 LRRC17Q8N6Y2 441 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 BOLLQ8N9W6 283 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 L3MBTL4Q8NA19 623 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 NFKBIDQ8NI38 313 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 RNASE11Q8TAA1 199 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 ZNF671Q8TAW3 534 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 FANK1Q8TC84 345 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 WFIKKN2Q8TEU8 576 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 SMARCD2Q92925 531 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 TMEM203Q969S6 136 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 FCRL1Q96LA6 429 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 MED18Q9BUE0 208 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 SPNS1Q9H2V7 528 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 SPHK2Q9NRA0 654 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 ACER3Q9NUN7 267 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 HRASLS2Q9NWW9 162 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 IKZF2Q9UKS7 526 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 GSTK1Q9Y2Q3 226 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 SNX11Q9Y5W9 270 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 HCFC2Q9Y5Z7 792 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 SPIN1Q9Y657 262 aaPredicted RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 U3KQ87 197 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 LAMA1P25391 3075 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 ARRDC5A6NEK1 342 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 TMEM150CB9EJG8 249 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 C9J4A7 227 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 SLC30A4O14863 429 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 YY2O15391 372 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 LILRB3O75022 631 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ATG12O94817 140 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 TIMP1P01033 207 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 GASTP01350 101 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 KLKB1P03952 638 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 FAM157BP0CG42 384 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 PRG2P13727 222 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ETFAP13804 333 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 LHCGRP22888 699 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 HMGCLP35914 325 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ETV1P50549 477 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 RUNX3Q13761 415 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 KLHL22Q53GT1 634 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 GPRC6AQ5T6X5 926 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 MED27Q6P2C8 311 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ZNF730Q6ZMV8 503 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 RTL4Q6ZR62 310 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 FAM92BQ6ZTR7 304 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 LAPTM4BQ86VI4 370 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms