RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ATG4BQ9Y4P1 393 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 INMT-MINDY4F8WBC2 141 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 J3QRE1 110 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 EMC8O43402 210 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 KLF4O43474 513 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 ELK1P19419 428 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 ATP6V1E1P36543 226 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 ARFIP1P53367 373 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 MAB21L1Q13394 359 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 FZD5Q13467 585 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 PGGHGQ32M88 737 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 ZNF57Q68EA5 555 aaPredicted RBP11.5□□□□□ -0.57
NPC1-202ENST00000540608 MRM1Q6IN84 353 aaKnown RBP11.5□□□□□ -0.57
NPC1-202ENST00000540608 KLBQ86Z14 1044 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 NKAIN4Q8IVV8 208 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 RAB42Q8N4Z0 105 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 BBS1Q8NFJ9 593 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 SNAPC3Q92966 411 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 LGR4Q9BXB1 951 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 POLMQ9NP87 494 aaPredicted RBP11.5□□□□□ -0.57
NPC1-202ENST00000540608 PRDM7Q9NQW5 492 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 MCUBQ9NWR8 336 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 CALML5Q9NZT1 146 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 H2AFY2Q9P0M6 372 aaPredicted RBP11.5□□□□□ -0.57
NPC1-202ENST00000540608 TNFRSF10DQ9UBN6 386 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 ANTXRLA6NF34 631 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 OTOL1A6NHN0 477 aaPredicted RBP11.5□□□□□ -0.57
NPC1-202ENST00000540608 OR2B3O76000 313 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 HMGN1P05114 100 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 SLC35G4P0C7Q5 338 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 HIST1H1TP22492 207 aaPredicted RBP11.5□□□□□ -0.57
NPC1-202ENST00000540608 PRKAR1BP31321 381 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 VIPR2P41587 438 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 MTNR1BP49286 362 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 CLCNKAP51800 687 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 BDH1Q02338 343 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 BTBD16Q32M84 506 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 LAMTOR1Q6IAA8 161 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 MBOAT2Q6ZWT7 520 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 CREB3L2Q70SY1 520 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 SPRED2Q7Z698 418 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 ACOT4Q8N9L9 421 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 OR2A1Q8NGT9 310 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 OR8K5Q8NH50 307 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 MS4A6EQ96DS6 147 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 FERD3LQ96RJ6 166 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 WACQ9BTA9 647 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 KLHL28Q9NXS3 571 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 CES1P1Q9UKY3 287 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 ENTPD4Q9Y227 616 aa11.5□□□□□ -0.57
NPC1-202ENST00000540608 GTPBP1O00178 669 aaKnown RBP11.49□□□□□ -0.57
NPC1-202ENST00000540608 RFXAPO00287 272 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 AKR7A2O43488 359 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 PLOD3O60568 738 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 RGS9O75916 674 aaPredicted RBP11.49□□□□□ -0.57
NPC1-202ENST00000540608 CSNK2A2P19784 350 aaPredicted RBP11.49□□□□□ -0.57
NPC1-202ENST00000540608 BCL6P41182 706 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 GPR4P46093 362 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 BTG1P62324 171 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 CDK3Q00526 305 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 CSTF1Q05048 431 aaKnown RBP11.49□□□□□ -0.57
NPC1-202ENST00000540608 ABHD17CQ6PCB6 329 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 LYPD8Q6UX82 237 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 ZNF620Q6ZNG0 422 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 ZNF767PQ75MW2 155 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 NUP43Q8NFH3 380 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 AKAP1Q92667 903 aaKnown RBP eCLIP11.49□□□□□ -0.57
NPC1-202ENST00000540608 KCNN2Q9H2S1 579 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 GALNT9Q9HCQ5 603 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 ZDHHC4Q9NPG8 344 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 NLGN3Q9NZ94 848 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 CXXC1Q9P0U4 656 aaPredicted RBP11.49□□□□□ -0.57
NPC1-202ENST00000540608 EXTL2Q9UBQ6 330 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 CHD9Q3L8U1 2897 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 A0A0X1KG70 313 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 C4orf51C9J302 202 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 ERI3O43414 337 aaKnown RBP11.49□□□□□ -0.57
NPC1-202ENST00000540608 RNF13O43567 381 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 SLC2A10O95528 541 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 AIFM1O95831 613 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 THY1P04216 161 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 C8orf89P0DMQ9 161 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 ATP5A1P25705 553 aaKnown RBP11.49□□□□□ -0.57
NPC1-202ENST00000540608 MPIP34949 423 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 CTNNB1P35222 781 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 AGFG1P52594 562 aaKnown RBP11.49□□□□□ -0.57
NPC1-202ENST00000540608 MRPL28Q13084 256 aaKnown RBP11.49□□□□□ -0.57
NPC1-202ENST00000540608 IDNKQ5T6J7 187 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 BICRALQ6AI39 1079 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 GDF7Q7Z4P5 450 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 NRMQ8IXM6 262 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 SLC37A3Q8NCC5 494 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 OR2T33Q8NG76 320 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 OR4M2Q8NGB6 313 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 ELP4Q96EB1 424 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 PAWRQ96IZ0 340 aaKnown RBP11.49□□□□□ -0.57
NPC1-202ENST00000540608 MACROD1Q9BQ69 325 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 HDHD2Q9H0R4 259 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 ISG20L2Q9H9L3 353 aaKnown RBP11.49□□□□□ -0.57
NPC1-202ENST00000540608 SLC28A3Q9HAS3 691 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms