RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 IDH2P48735 452 aaKnown RBP20.83■□□□□ 0.93
HOMER3-204ENST00000539827 CRISP1P54107 249 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 GABARAPL2P60520 117 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 FUT7Q11130 342 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 TARDBPQ13148 414 aaKnown RBP eCLIP20.83■□□□□ 0.93
HOMER3-204ENST00000539827 SQSTM1Q13501 440 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 NEDD8Q15843 81 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 ARHGAP40Q5TG30 622 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 NPSR1Q6W5P4 371 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 PRR23CQ6ZRP0 262 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 PLEKHM3Q6ZWE6 761 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 OR4K5Q8NGD3 323 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 APH1BQ8WW43 257 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 DGCR14Q96DF8 476 aaKnown RBP20.83■□□□□ 0.93
HOMER3-204ENST00000539827 GTPBP2Q9BX10 602 aaKnown RBP20.83■□□□□ 0.93
HOMER3-204ENST00000539827 SMOC1Q9H4F8 434 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 REV1Q9UBZ9 1251 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 SLC6A14Q9UN76 642 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 C17orf105B2RV13 164 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 PRAMEF2O60811 474 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 ABCB7O75027 752 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 CYP7B1O75881 506 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 IGKV1D-16P01601 117 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 HTR1AP08908 422 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 CCDC159P0C7I6 412 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 MSL3P1P0C860 447 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 CHMP24386 653 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 PEX19P40855 299 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 PMS2P3Q13401 168 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 DSG2Q14126 1118 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 PTGES3Q15185 160 aaKnown RBP20.83■□□□□ 0.92
HOMER3-204ENST00000539827 NNATQ16517 81 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 EIPR1Q53HC9 387 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 VWA2Q5GFL6 755 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 ARHGAP22Q7Z5H3 698 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 PRSS58Q8IYP2 241 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 MORN4Q8NDC4 146 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 CEP76Q8TAP6 659 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 DIO2Q92813 273 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 ZNF566Q969W8 418 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 CLIP3Q96DZ5 547 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 OR1F2PQ96R84 312 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 PELOQ9BRX2 385 aaKnown RBP20.83■□□□□ 0.92
HOMER3-204ENST00000539827 FTSJ1Q9UET6 329 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 MMACHCQ9Y4U1 282 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 CEPT1Q9Y6K0 416 aa20.83■□□□□ 0.92
HOMER3-204ENST00000539827 TOX3O15405 576 aaPredicted RBP20.82■□□□□ 0.92
HOMER3-204ENST00000539827 WBP4O75554 376 aaKnown RBP20.82■□□□□ 0.92
HOMER3-204ENST00000539827 SOX14O95416 240 aa20.82■□□□□ 0.92
HOMER3-204ENST00000539827 ESRRGP62508 458 aa20.82■□□□□ 0.92
HOMER3-204ENST00000539827 FLYWCH1Q4VC44 716 aa20.82■□□□□ 0.92
HOMER3-204ENST00000539827 MRPL2Q5T653 305 aaKnown RBP20.82■□□□□ 0.92
HOMER3-204ENST00000539827 GPR141Q7Z602 305 aa20.82■□□□□ 0.92
HOMER3-204ENST00000539827 MEX3DQ86XN8 651 aaKnown RBP20.82■□□□□ 0.92
HOMER3-204ENST00000539827 C16orf52Q8NHV5 167 aa20.82■□□□□ 0.92
HOMER3-204ENST00000539827 IGHV5-10-1A0A0J9YXX1 117 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 A0A1B0GX78 115 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 M0R129 80 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ARHGAP33O14559 1287 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 CLPSP04118 112 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 GKN3PP0CG01 181 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 OSMP13725 252 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 NID1P14543 1247 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 TRAM2Q15035 370 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ZER1Q7Z7L7 766 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 LSRQ86X29 649 aaPredicted RBP20.81■□□□□ 0.92
HOMER3-204ENST00000539827 SPARTQ8N0X7 666 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ZNF615Q8N8J6 731 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 DGCR6LQ9BY27 220 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ZNF226Q9NYT6 803 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ENOPH1Q9UHY7 261 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ZDBF2Q9HCK1 2354 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 A0A087WUU8 490 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 FAM20BO75063 409 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 CER1O95813 267 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 PRG2P13727 222 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 MMP11P24347 488 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 GALNSP34059 522 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 KRT20P35900 424 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ZNF136P52737 540 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 EFNA3P52797 238 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 DAB2P98082 770 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ST3GAL3Q11203 375 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 TMEM151BQ8IW70 566 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ZNF321PQ8N8H1 164 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 OR4D9Q8NGE8 314 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 IFI44Q8TCB0 444 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 PTPMT1Q8WUK0 201 aaPredicted RBP20.81■□□□□ 0.92
HOMER3-204ENST00000539827 NR4A3Q92570 626 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 SLC38A4Q969I6 547 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 NMD3Q96D46 503 aaKnown RBP20.81■□□□□ 0.92
HOMER3-204ENST00000539827 CCDC74BQ96LY2 380 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ZNF578Q96N58 590 aaPredicted RBP20.81■□□□□ 0.92
HOMER3-204ENST00000539827 RHNO1Q9BSD3 238 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ITPAQ9BY32 194 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 CCDC90BQ9GZT6 254 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 POLR2J3Q9H1A7 115 aaKnown RBP20.81■□□□□ 0.92
HOMER3-204ENST00000539827 POLE3Q9NRF9 147 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ERVK-18Q9QC07 812 aa20.81■□□□□ 0.92
HOMER3-204ENST00000539827 ZAR1LA6NP61 321 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms