RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 C19orf48Q6RUI8 117 aa14.22□□□□□ -0.13
DDB1-216ENST00000539739 IL20RBQ6UXL0 311 aa14.22□□□□□ -0.13
DDB1-216ENST00000539739 SERPINA11Q86U17 422 aa14.22□□□□□ -0.13
DDB1-216ENST00000539739 SLC15A3Q8IY34 581 aa14.22□□□□□ -0.13
DDB1-216ENST00000539739 DEFB107AQ8IZN7 70 aa14.22□□□□□ -0.13
DDB1-216ENST00000539739 CHDHQ8NE62 594 aaPredicted RBP14.22□□□□□ -0.13
DDB1-216ENST00000539739 DIO2Q92813 273 aa14.22□□□□□ -0.13
DDB1-216ENST00000539739 SPACA9Q96E40 222 aaPredicted RBP14.22□□□□□ -0.13
DDB1-216ENST00000539739 CRELD1Q96HD1 420 aa14.22□□□□□ -0.13
DDB1-216ENST00000539739 UTP23Q9BRU9 249 aaKnown RBP14.22□□□□□ -0.13
DDB1-216ENST00000539739 RNF32Q9H0A6 362 aa14.22□□□□□ -0.13
DDB1-216ENST00000539739 ZBTB20Q9HC78 741 aaPredicted RBP14.22□□□□□ -0.13
DDB1-216ENST00000539739 ADA2Q9NZK5 511 aa14.22□□□□□ -0.13
DDB1-216ENST00000539739 CFAP47Q6ZTR5 3102 aa14.22□□□□□ -0.13
DDB1-216ENST00000539739 MAP1BP46821 2468 aaKnown RBP14.21□□□□□ -0.13
DDB1-216ENST00000539739 HS6ST1O60243 411 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 ZNF354AO60765 605 aaPredicted RBP14.21□□□□□ -0.13
DDB1-216ENST00000539739 TNFRSF21O75509 655 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 OR6B1O95007 311 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 IL33O95760 270 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 WDPCPO95876 746 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 HLCSP50747 726 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 PNLIPRP2P54317 469 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 ARPC4P59998 168 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 ARG2P78540 354 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 EFR3AQ14156 821 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 GPAT3Q53EU6 434 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 HEPHL1Q6MZM0 1159 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 FIGNL1Q6PIW4 674 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 FBXO27Q8NI29 283 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 FAM110BQ8TC76 370 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 EFHD2Q96C19 240 aaPredicted RBP14.21□□□□□ -0.13
DDB1-216ENST00000539739 ITPKCQ96DU7 683 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 COL21A1Q96P44 957 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 TRNT1Q96Q11 434 aaKnown RBP14.21□□□□□ -0.13
DDB1-216ENST00000539739 ADOQ96SZ5 270 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 TMEM38AQ9H6F2 299 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 A4GALTQ9NPC4 353 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 CMTM6Q9NX76 183 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 CALML5Q9NZT1 146 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 ABCD2Q9UBJ2 740 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 ZNF451Q9Y4E5 1061 aa14.21□□□□□ -0.13
DDB1-216ENST00000539739 OR6C70A6NIJ9 312 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 C5orf58C9J3I9 102 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 TP53I11O14683 189 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 GYG2O15488 501 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 SLC28A2O43868 658 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 TSPAN2O60636 221 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 DNAJA2O60884 412 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 STX11O75558 287 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 S100A1P23297 94 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 LCN1P31025 176 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 CPOXP36551 454 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 RPP38P78345 283 aaKnown RBP14.2□□□□□ -0.14
DDB1-216ENST00000539739 RBBP4Q09028 425 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 NTRK2Q16620 822 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.2□□□□□ -0.14
DDB1-216ENST00000539739 ZNF630Q2M218 657 aaPredicted RBP14.2□□□□□ -0.14
DDB1-216ENST00000539739 COL28A1Q2UY09 1125 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 CCNJQ5T5M9 372 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 IGFL2Q6UWQ7 119 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 LYPD8Q6UX82 237 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 NUP54Q7Z3B4 507 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 CYP4Z2PQ8N1L4 340 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 METTL25Q8N6Q8 603 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 C11orf65Q8NCR3 313 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 FAM13CQ8NE31 585 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 HAS2Q92819 552 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 TMCO6Q96DC7 493 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 SGCZQ96LD1 299 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 NR1H4Q96RI1 486 aaPredicted RBP14.2□□□□□ -0.14
DDB1-216ENST00000539739 CDRT15Q96T59 188 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 SDF2Q99470 211 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 PIF1Q9H611 641 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 RNPEPL1Q9HAU8 725 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 POLE3Q9NRF9 147 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 TAS2R1Q9NYW7 299 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 PLA2G3Q9NZ20 509 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 TMEM181Q9P2C4 612 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 CNTRLQ7Z7A1 2325 aa14.2□□□□□ -0.14
DDB1-216ENST00000539739 OR5H15A6NDH6 313 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 BCHEP06276 602 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 NUDT7P0C024 238 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 TFPTP0C1Z6 253 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 ARAFP10398 606 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 CD96P40200 585 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 ST13P50502 369 aaKnown RBP14.19□□□□□ -0.14
DDB1-216ENST00000539739 CRISP3P54108 245 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 EEFSECP57772 596 aaKnown RBP14.19□□□□□ -0.14
DDB1-216ENST00000539739 LIPEQ05469 1076 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 KCNAB2Q13303 367 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 TUBA3CQ13748 450 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 BCL2A1Q16548 175 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 SYPL1Q16563 259 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 ZNF791Q3KP31 576 aaPredicted RBP14.19□□□□□ -0.14
DDB1-216ENST00000539739 DNAL1Q4LDG9 190 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 ZNF468Q5VIY5 522 aaPredicted RBP14.19□□□□□ -0.14
DDB1-216ENST00000539739 ERICH5Q6P6B1 374 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 TUBA3EQ6PEY2 450 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 LRRC74BQ6ZQY2 392 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms