RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 DUSP5Q16690 384 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 FAM27D1Q5T7N8 215 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 PAMR1Q6UXH9 720 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 SLC36A4Q6YBV0 504 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF761Q86XN6 746 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-210ENST00000539599 KLBQ86Z14 1044 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 OR5T3Q8NGG3 340 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 SPRYD4Q8WW59 207 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-210ENST00000539599 RAB7BQ96AH8 199 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 PINK1Q9BXM7 581 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 RSPH9Q9H1X1 276 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-210ENST00000539599 TRIM45Q9H8W5 580 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-210ENST00000539599 C3orf14Q9HBI5 128 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 STARD5Q9NSY2 213 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 BRWD1Q9NSI6 2320 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 LOC105369274A0A096LPK9 316 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 LOC102723532A0A0G2JNH3 316 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 PEX12O00623 359 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 CASKO14936 926 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 EMC8O43402 210 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 CTSVO60911 334 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 RNGTTO60942 597 aaKnown RBP13.14□□□□□ -0.31
UBE3B-210ENST00000539599 MRPL3P09001 348 aaKnown RBP13.14□□□□□ -0.31
UBE3B-210ENST00000539599 HSD17B2P37059 387 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 SLC1A3P43003 542 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF155Q12901 538 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-210ENST00000539599 GLYR1Q49A26 553 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-210ENST00000539599 FRRS1Q6ZNA5 592 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 OR4N4Q8N0Y3 316 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 RAB42Q8N4Z0 105 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 SCAIQ8N9R8 606 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 ADAMTS15Q8TE58 950 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 UBASH3BQ8TF42 649 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 CHAC2Q8WUX2 184 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 LCN9Q8WX39 176 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 TP53INP1Q96A56 240 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 CTRCQ99895 268 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 CCDC32Q9BV29 185 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 NT5DC2Q9H857 520 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 ADAP2Q9NPF8 381 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 HINT3Q9NQE9 182 aaKnown RBP13.14□□□□□ -0.31
UBE3B-210ENST00000539599 SIRT4Q9Y6E7 314 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-210ENST00000539599 A0A0G2JPF8 293 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 HNRNPCL2B2RXH8 293 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 HNRNPCL3B7ZW38 293 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.13□□□□□ -0.31
UBE3B-210ENST00000539599 HNRNPCL4P0DMR1 293 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 DDX5P17844 614 aaKnown RBP13.13□□□□□ -0.31
UBE3B-210ENST00000539599 COL9A1P20849 921 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 ATP6V1E1P36543 226 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 PRR5P85299 388 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 UBE3AQ05086 875 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 COX10Q12887 443 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 TBRG1Q3YBR2 411 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 ENPP7Q6UWV6 458 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 CPOQ8IVL8 374 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 C7orf61Q8IZ16 206 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 TMEM52Q8NDY8 209 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 FLCNQ8NFG4 579 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 SLC41A3Q96GZ6 507 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 SENP5Q96HI0 755 aaPredicted RBP13.13□□□□□ -0.31
UBE3B-210ENST00000539599 KCTD7Q96MP8 289 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 SECISBP2Q96T21 854 aaKnown RBP13.13□□□□□ -0.31
UBE3B-210ENST00000539599 B3GAT2Q9NPZ5 323 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 CACNA1IQ9P0X4 2223 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 MEIOCA2RUB1 952 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 CTSBP07858 339 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 CLUP10909 449 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 MPIP34949 423 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 RAB25P57735 213 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 C9orf50Q5SZB4 431 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 VASNQ6EMK4 673 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 PLBD1Q6P4A8 553 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 FIGNL1Q6PIW4 674 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF836Q6ZNA1 936 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 TRIM69Q86WT6 500 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 MARCH9Q86YJ5 346 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 OR1E3Q8WZA6 343 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 ST6GAL2Q96JF0 529 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 APOOQ9BUR5 198 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 RANGRFQ9HD47 186 aaPredicted RBP13.13□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF624Q9P2J8 865 aaPredicted RBP13.13□□□□□ -0.31
UBE3B-210ENST00000539599 PRKAG2Q9UGJ0 569 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 FBXL4Q9UKA2 621 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF780BQ9Y6R6 833 aa13.13□□□□□ -0.31
UBE3B-210ENST00000539599 SURF4O15260 269 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 MAGEB4O15481 346 aaPredicted RBP13.12□□□□□ -0.31
UBE3B-210ENST00000539599 PLA2G10O15496 165 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 REM1O75628 298 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 ZGLP1P0C6A0 271 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 TSPAN31Q12999 210 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 FZD5Q13467 585 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 RUNX2Q13950 521 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 EXOSC7Q15024 291 aaKnown RBP13.12□□□□□ -0.31
UBE3B-210ENST00000539599 TRAM2Q15035 370 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.12□□□□□ -0.31
UBE3B-210ENST00000539599 PUS10Q3MIT2 529 aaKnown RBP13.12□□□□□ -0.31
UBE3B-210ENST00000539599 PLK5Q496M5 336 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 MTSS1LQ765P7 747 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 NR2C2APQ86WQ0 139 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms