RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 TM4SF4P48230 202 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LARP4Q71RC2 724 aaKnown RBP eCLIP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 SCD5Q86SK9 330 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 ELMOD2Q8IZ81 293 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 OR5AR1Q8NGP9 310 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 MAL2Q969L2 176 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 TCEAL4Q96EI5 215 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 TIMM29Q9BSF4 260 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 PBDC1Q9BVG4 233 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LMAN1LQ9HAT1 526 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 CSNK1G1Q9HCP0 422 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 DCAF13Q9NV06 445 aaKnown RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 UBE2J1Q9Y385 318 aaPredicted RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 NAALAD2Q9Y3Q0 740 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LOC102723532A0A0G2JNH3 316 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 NPIPB15A6NHN6 443 aaPredicted RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LATO43561 262 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 EDN1P05305 212 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 FCER2P06734 321 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 DNASE1P24855 282 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 FOLR3P41439 243 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 INHBCP55103 352 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 RPS26P62854 115 aaKnown RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 SIM1P81133 766 aaPredicted RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 CDK5R2Q13319 367 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 TUBB3Q13509 450 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 HNRNPA1L2Q32P51 320 aaKnown RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 VTCN1Q7Z7D3 282 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LRRTM3Q86VH5 581 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 OR4N5Q8IXE1 308 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 TRMT10AQ8TBZ6 339 aaKnown RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 CD300LFQ8TDQ1 290 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 ALOXE3Q9BYJ1 711 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LIN28AQ9H9Z2 209 aaKnown RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 SLC7A7Q9UM01 511 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 SRPK3Q9UPE1 567 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 MAS1P04201 325 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 ITGAMP11215 1152 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 FASLGP48023 281 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 PITPNBP48739 271 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 NTRK2Q16620 822 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 PRAMEF8Q5VWM4 474 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 PRAMEF7Q5VXH5 474 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 PGM2L1Q6PCE3 622 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 TRIM46Q7Z4K8 759 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 FUNDC2Q9BWH2 189 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 SMOXQ9NWM0 555 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 OR6C2Q9NZP2 312 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 CER1O95813 267 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 PTHP01270 115 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 CEBPBP17676 345 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 IVDP26440 423 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LRRC37A5PQ49AS3 106 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 RNASE10Q5GAN6 216 aaKnown RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 EEF1A1P5Q5VTE0 462 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 NADSYN1Q6IA69 706 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 RTL6Q6ICC9 239 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 OR4K13Q8NH42 304 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 CRB3Q9BUF7 120 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 BTBD2Q9BX70 525 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 EIF5A2Q9GZV4 153 aaKnown RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 NMNAT1Q9HAN9 279 aaPredicted RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 A0A0G2JMP0 313 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 KCNK5O95279 499 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 TIMP2P16035 220 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 CHMP24386 653 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 CDK3Q00526 305 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF542PQ5EBM4 170 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM201Q5SNT2 666 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 FAM205BPQ63HN1 556 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 HAGHLQ6PII5 290 aaPredicted RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM150AQ86TG1 271 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 SLC5A8Q8N695 610 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 MRPL43Q8N983 215 aaKnown RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR4M2Q8NGB6 313 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 PDLIM5Q96HC4 596 aaKnown RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 PRRC1Q96M27 445 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF285Q96NJ3 590 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM165Q9HC07 324 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 INPP5EQ9NRR6 644 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 H7C2Y5 167 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 SMAD9O15198 467 aaKnown RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR2T1O43869 369 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ARSAP15289 507 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 GPX3P22352 226 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 TNFSF4P23510 183 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF140P52738 457 aaPredicted RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 PIGFQ07326 219 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 CEACAM7Q14002 265 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 PPA1Q15181 289 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 TTC9BQ8N6N2 239 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ACOT4Q8N9L9 421 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF417Q8TAU3 575 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ADAMTS19Q8TE59 1207 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM239Q8WW34 195 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 RRNAD1Q96FB5 475 aaKnown RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 BEX2Q9BXY8 128 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 UNKLQ9H9P5 680 aaKnown RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 BEX1Q9HBH7 125 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 MIA3Q5JRA6 1907 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms