RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 GSTM3P21266 225 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 CLDN2P57739 230 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 MTFR2Q6P444 385 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 CPOQ8IVL8 374 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 GPR135Q8IZ08 494 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 SAMD12Q8N8I0 201 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 OR11H7Q8NGC8 314 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 OR11H4Q8NGC9 324 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 POF1BQ8WVV4 589 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 DNAJA4Q8WW22 397 aaPredicted RBP18.99■□□□□ 0.63
TMEM260-203ENST00000539559 CCDC120Q96HB5 630 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 THAP7Q9BT49 309 aaPredicted RBP18.99■□□□□ 0.63
TMEM260-203ENST00000539559 MGAT4AQ9UM21 535 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 LOC105371267A0A1B0GV96 52 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 C4orf51C9J302 202 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 SURF4O15260 269 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 LZTS3O60299 673 aaPredicted RBP18.99■□□□□ 0.63
TMEM260-203ENST00000539559 PAPLNO95428 1278 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 ENPP1P22413 925 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 OMPP47874 163 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 TSPAN31Q12999 210 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 ZNF767PQ75MW2 155 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 NRMQ8IXM6 262 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 ANGPTL6Q8NI99 470 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 XKR8Q9H6D3 395 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 ISYNA1Q9NPH2 558 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 HINT3Q9NQE9 182 aaKnown RBP18.99■□□□□ 0.63
TMEM260-203ENST00000539559 ENAMQ9NRM1 1142 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 CHST2Q9Y4C5 530 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 TSPAN11A1L157 253 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 ANTXRLA6NF34 631 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 TRIM3O75382 744 aaPredicted RBP18.98■□□□□ 0.63
TMEM260-203ENST00000539559 FGF19O95750 216 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 C6P13671 934 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 DSG2Q14126 1118 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 TOR2AQ5JU69 321 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 SMARCD3Q6STE5 483 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 METAP1DQ6UB28 335 aaPredicted RBP18.98■□□□□ 0.63
TMEM260-203ENST00000539559 OR8H3Q8N146 312 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 TMEM255BQ8WV15 326 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 HSD17B8Q92506 261 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 MS4A3Q96HJ5 214 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 MED28Q9H204 178 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 RHBGQ9H310 441 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 ATP13A2Q9NQ11 1180 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 SLC35C2Q9NQQ7 365 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 ZNF624Q9P2J8 865 aaPredicted RBP18.98■□□□□ 0.63
TMEM260-203ENST00000539559 LOC105369274A0A096LPK9 316 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 CXCL3P19876 107 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 SLC6A1P30531 599 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 ZNF322Q6U7Q0 402 aaPredicted RBP18.98■□□□□ 0.63
TMEM260-203ENST00000539559 OR4N4Q8N0Y3 316 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 BEST4Q8NFU0 473 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 ZNF431Q8TF32 576 aaPredicted RBP18.98■□□□□ 0.63
TMEM260-203ENST00000539559 RGMAQ96B86 450 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 BEX1Q9HBH7 125 aa18.98■□□□□ 0.63
TMEM260-203ENST00000539559 SYNDIG1LA6NDD5 238 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 CDC42EP2O14613 210 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 LATO43561 262 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 THY1P04216 161 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 KELP23276 732 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 LRRTM4Q86VH4 590 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 CACUL1Q86Y37 369 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 OR2L2Q8NH16 312 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 OR8K5Q8NH50 307 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 SPPL3Q8TCT6 385 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 SAMD8Q96LT4 415 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 ABHD1Q96SE0 405 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 TNFRSF10DQ9UBN6 386 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 CBLCQ9ULV8 474 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 RASD1Q9Y272 281 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 CIB4A0PJX0 185 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 FCMRO60667 390 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 DDX6P26196 483 aaKnown RBP eCLIP18.97■□□□□ 0.635e-6■■■■■ 46.6
TMEM260-203ENST00000539559 SSTR2P30874 369 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 BTCP35070 178 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 KHKP50053 298 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 CCR8P51685 355 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 PLA1AQ53H76 456 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 ESCO2Q56NI9 601 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 PLBD1Q6P4A8 553 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 RTL10Q7L3V2 364 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 MRGPREQ86SM8 312 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 TMEM99Q8N816 258 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 BBS10Q8TAM1 723 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 PHOSPHO2Q8TCD6 241 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 ARRDC3Q96B67 414 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 CREB3L1Q96BA8 519 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 HYLS1Q96M11 299 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 SCN3AQ9NY46 2000 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 A0A0B4J203 849 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 E9PI62 339 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 BTN3A3O00478 584 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 RNF13O43567 381 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 EPHA5P54756 1037 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 NTHL1P78549 312 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 C18orf63Q68DL7 685 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 OR4C11Q6IEV9 310 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 ARL9Q6T311 187 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 RASSF6Q6ZTQ3 369 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms