RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CCDC103Q8IW40 242 aa15.95■□□□□ 0.14
PCDHB17P-201ENST00000539533 METTL27Q8N6F8 245 aaPredicted RBP15.95■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR7G2Q8NG99 324 aa15.95■□□□□ 0.14
PCDHB17P-201ENST00000539533 ZNF675Q8TD23 568 aa15.95■□□□□ 0.14
PCDHB17P-201ENST00000539533 CCDC74AQ96AQ1 378 aa15.95■□□□□ 0.14
PCDHB17P-201ENST00000539533 RBCK1Q9BYM8 510 aa15.95■□□□□ 0.14
PCDHB17P-201ENST00000539533 FKBP14Q9NWM8 211 aa15.95■□□□□ 0.14
PCDHB17P-201ENST00000539533 TMA7Q9Y2S6 64 aaKnown RBP15.95■□□□□ 0.14
PCDHB17P-201ENST00000539533 SOX18P35713 384 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR1E2P47887 323 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 GPLD1P80108 840 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 PRR5P85299 388 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 MAT1AQ00266 395 aaKnown RBP15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 RSBN1Q5VWQ0 802 aaPredicted RBP15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 BHLHB9Q6PI77 547 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 FAM111BQ6SJ93 734 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR56A1Q8NGH5 318 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 SPPL2AQ8TCT8 520 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 FEVQ99581 238 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 RSPO3Q9BXY4 272 aaPredicted RBP15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 RNF167Q9H6Y7 350 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 C3orf14Q9HBI5 128 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 KCNE3Q9Y6H6 103 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 CPED1A4D0V7 1026 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 NOTOA8MTQ0 251 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 SIGLEC6O43699 453 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 ATXN8OSP0DMR3 200 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 RAB38P57729 211 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 LPAL2Q16609 132 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 NDUFA9Q16795 377 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 DUSP7Q16829 419 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 SOWAHCQ53LP3 525 aaPredicted RBP15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 PEAR1Q5VY43 1037 aaPredicted RBP15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 WDR53Q7Z5U6 358 aaPredicted RBP15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 TSEN54Q7Z6J9 526 aaKnown RBP15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 SAMD14Q8IZD0 417 aaPredicted RBP15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR4C6Q8NH72 309 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 MOAP1Q96BY2 351 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 NUDT22Q9BRQ3 303 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 DUSP23Q9BVJ7 150 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 CHRNA10Q9GZZ6 450 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR51E2Q9H255 320 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 PRDM9Q9NQV7 894 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 QPCTLQ9NXS2 382 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 GPR83Q9NYM4 423 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 PADI2Q9Y2J8 665 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 PCDHGA3Q9Y5H0 932 aa15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 MN1Q10571 1320 aaPredicted RBP15.94■□□□□ 0.14
PCDHB17P-201ENST00000539533 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 PRAMEF25A6NGN4 478 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 IDH3BO43837 385 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 SLC28A2O43868 658 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 GPR75O95800 540 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 NUDT6P53370 316 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 SLC30A8Q8IWU4 369 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 GIMAP5Q96F15 307 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 FBXO4Q9UKT5 387 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 TMEM184BQ9Y519 407 aaPredicted RBP15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 LYVE1Q9Y5Y7 322 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 LY6G6EA0A0G2JKS1 128 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 TNFRSF11BO00300 401 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 STSP08842 583 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 ADORA3P0DMS8 318 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 KHKP50053 298 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 HSD11B2P80365 405 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 FAM53BQ14153 422 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 TRMT12Q53H54 448 aaKnown RBP15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 SMUG1Q53HV7 270 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 GUSBP11Q6P575 273 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 SLC5A8Q8N695 610 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 ANKRD9Q96BM1 317 aaPredicted RBP15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 PEX11GQ96HA9 241 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 TREX2Q9BQ50 279 aaPredicted RBP15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 P2RX2Q9UBL9 471 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 CAB39Q9Y376 341 aaPredicted RBP15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 U3KQA8 63 aa15.93■□□□□ 0.14
PCDHB17P-201ENST00000539533 TNFRSF10AO00220 468 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 CDC123O75794 336 aaPredicted RBP15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 CCNKO75909 580 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 PTHP01270 115 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 NR2F1P10589 423 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 IDH2P48735 452 aaKnown RBP15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 ARL4DP49703 201 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 FUT5Q11128 374 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 ELOAQ14241 798 aaKnown RBP15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 ERV3-1Q14264 604 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 ARMCX4Q5H9R4 360 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 TCTE1Q5JU00 501 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 STX19Q8N4C7 294 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 MMABQ96EY8 250 aaPredicted RBP15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 Q96MT0 163 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 COL21A1Q96P44 957 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR7D2Q96RA2 312 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 CENPOQ9BU64 300 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 MARCH7Q9H992 704 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 CAPN10Q9HC96 672 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 ATXN7L1Q9ULK2 861 aaPredicted RBP15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 PEX16Q9Y5Y5 336 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR2W5A6NFC9 320 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms