RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 E2F3O00716 465 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 AK1P00568 194 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 SNRPD2P62316 118 aaKnown RBP13.73□□□□□ -0.21
CACNB1-206ENST00000539338 HOXC5Q00444 222 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 LILRA2Q8N149 483 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 CACNG6Q9BXT2 260 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 PARPBPQ9NWS1 579 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 WNT16Q9UBV4 365 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 NHSQ6T4R5 1651 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 C12orf71A8MTZ7 269 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 FAM171A2A8MVW0 826 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 PRLP01236 227 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 MYOGP15173 224 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 ABHD17BQ5VST6 288 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 SPEM1Q8N4L4 309 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF565Q8N9K5 539 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 SLC6A16Q9GZN6 736 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 NAA50Q9GZZ1 169 aaKnown RBP13.72□□□□□ -0.21
CACNB1-206ENST00000539338 HSFX1Q9UBD0 423 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 LRP5O75197 1615 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 M0R036 132 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 GFRA2O00451 464 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 PTTG1O95997 202 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 FBLP22087 321 aaKnown RBP13.72□□□□□ -0.21
CACNB1-206ENST00000539338 WNT4P56705 351 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 FAM26DQ5JW98 314 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 PLAG1Q6DJT9 500 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 ASB12Q8WXK4 309 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 SLC39A13Q96H72 371 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 DPCDQ9BVM2 203 aaPredicted RBP13.72□□□□□ -0.21
CACNB1-206ENST00000539338 GAREM1Q9H706 876 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 TMEM14AQ9Y6G1 99 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 PAPPA2Q9BXP8 1791 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 MROH6A6NGR9 719 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 POLR1CO15160 346 aaPredicted RBP13.72□□□□□ -0.21
CACNB1-206ENST00000539338 GFRA3O60609 400 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 C21orf33P30042 268 aaPredicted RBP13.72□□□□□ -0.21
CACNB1-206ENST00000539338 SMN1Q16637 294 aaKnown RBP13.72□□□□□ -0.21
CACNB1-206ENST00000539338 TMEM53Q6P2H8 277 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 XKRXQ6PP77 449 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 PARS2Q7L3T8 475 aaKnown RBP13.72□□□□□ -0.21
CACNB1-206ENST00000539338 SGCDQ92629 289 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 OR10A4Q9H209 315 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 RANBP3Q9H6Z4 567 aaPredicted RBP13.72□□□□□ -0.21
CACNB1-206ENST00000539338 MAST2Q6P0Q8 1798 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 ANTXRLA6NF34 631 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 WASHC1A8K0Z3 465 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 TCN2P20062 427 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 SSTR4P31391 388 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 FAM76BQ5HYJ3 339 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 C1orf189Q5VU69 101 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 METTL2BQ6P1Q9 378 aaKnown RBP13.72□□□□□ -0.21
CACNB1-206ENST00000539338 WASH2PQ6VEQ5 465 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 LIPIQ6XZB0 460 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 B3GNT8Q7Z7M8 397 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 EID2Q8N6I1 236 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 SLC46A2Q9BY10 475 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF717Q9BY31 904 aaPredicted RBP13.72□□□□□ -0.21
CACNB1-206ENST00000539338 FKBP14Q9NWM8 211 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 ASB6Q9NWX5 421 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 LHX3Q9UBR4 397 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 PISDQ9UG56 409 aa13.72□□□□□ -0.21
CACNB1-206ENST00000539338 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 NPIPA5A0A0B4J1W7 369 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 NPIPA7E9PJI5 369 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 TP53I11O14683 189 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 KCNJ13O60928 360 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 HMGN2P05204 90 aaKnown RBP13.71□□□□□ -0.21
CACNB1-206ENST00000539338 DCNP07585 359 aaKnown RBP13.71□□□□□ -0.21
CACNB1-206ENST00000539338 NPIPA8P0DM63 369 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 CRHBPP24387 322 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 CCDC58Q4VC31 144 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 WDR53Q7Z5U6 358 aaPredicted RBP13.71□□□□□ -0.21
CACNB1-206ENST00000539338 TMEFF1Q8IYR6 380 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 ZC3H10Q96K80 434 aaKnown RBP13.71□□□□□ -0.21
CACNB1-206ENST00000539338 NUAK1O60285 661 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF888P0CJ79 500 aaPredicted RBP13.71□□□□□ -0.21
CACNB1-206ENST00000539338 DRD5P21918 477 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 FOLR3P41439 243 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 GLP1RP43220 463 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 TSC22D1Q15714 1073 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 CDNFQ49AH0 187 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 HES5Q5TA89 166 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 LCTLQ6UWM7 567 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 DPPA4Q7L190 304 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 PDZD3Q86UT5 571 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 MS4A15Q8N5U1 240 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 DAZLQ92904 295 aaKnown RBP13.71□□□□□ -0.21
CACNB1-206ENST00000539338 ELSPBP1Q96BH3 223 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 BCL7BQ9BQE9 202 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 MMP28Q9H239 520 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 ACOT13Q9NPJ3 140 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF701Q9NV72 531 aaPredicted RBP13.71□□□□□ -0.21
CACNB1-206ENST00000539338 UBQLN2Q9UHD9 624 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 KRBA1A5PL33 1030 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF701M0R085 212 aaPredicted RBP13.71□□□□□ -0.21
CACNB1-206ENST00000539338 UPK1BO75841 260 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 UCHL1P09936 223 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 NUDT7P0C024 238 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 TIMP2P16035 220 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms