RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 TM4SF18Q96CE8 201 aa13.08□□□□□ -0.32
CCDC144NL-202ENST00000539177 C1GALT1C1Q96EU7 318 aa13.08□□□□□ -0.32
CCDC144NL-202ENST00000539177 GMPPAQ96IJ6 420 aaPredicted RBP13.08□□□□□ -0.32
CCDC144NL-202ENST00000539177 VSTM2LQ96N03 204 aa13.08□□□□□ -0.32
CCDC144NL-202ENST00000539177 ZNF681Q96N22 645 aa13.08□□□□□ -0.32
CCDC144NL-202ENST00000539177 AMBRA1Q9C0C7 1298 aa13.08□□□□□ -0.32
CCDC144NL-202ENST00000539177 FARSBQ9NSD9 589 aaKnown RBP13.08□□□□□ -0.32
CCDC144NL-202ENST00000539177 CDC42EP3Q9UKI2 254 aa13.08□□□□□ -0.32
CCDC144NL-202ENST00000539177 PSME2Q9UL46 239 aa13.08□□□□□ -0.32
CCDC144NL-202ENST00000539177 ACOT9Q9Y305 439 aa13.08□□□□□ -0.32
CCDC144NL-202ENST00000539177 ALPK2Q86TB3 2170 aa13.08□□□□□ -0.32
CCDC144NL-202ENST00000539177 ANK2Q01484 3957 aa13.08□□□□□ -0.32
CCDC144NL-202ENST00000539177 IGHV4-30-2A0A087WSY4 118 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 FAM187AA6NFU0 413 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 SS18L1O75177 396 aaPredicted RBP13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 SLU7O95391 586 aaKnown RBP13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 OPN1LWP04000 364 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 CRABP2P29373 138 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 MRPS25P82663 173 aaKnown RBP13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 GALNT1Q10472 559 aaPredicted RBP13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 ZNF155Q12901 538 aaPredicted RBP13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 IFT88Q13099 833 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 ADAM5Q6NVV9 412 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 DNM1P46Q6ZS02 220 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 BEND4Q6ZU67 534 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 RHEBL1Q8TAI7 183 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 ZNF675Q8TD23 568 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 NSUN5Q96P11 429 aaKnown RBP13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 FAIM2Q9BWQ8 316 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 BEX2Q9BXY8 128 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 PTGES2Q9H7Z7 377 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 FANCFQ9NPI8 374 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 GPR52Q9Y2T5 361 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 MALRD1Q5VYJ5 2156 aa13.07□□□□□ -0.32
CCDC144NL-202ENST00000539177 BCAS2O75934 225 aaPredicted RBP13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 NTN1O95631 604 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 PTNP21246 168 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 RFX3P48380 749 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 MRPS22P82650 360 aaKnown RBP13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 C2orf54Q08AI8 447 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 TRAF3Q13114 568 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 PGGHGQ32M88 737 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 ZNF672Q499Z4 452 aaPredicted RBP13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 NCMAPQ5T1S8 102 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 C3orf62Q6ZUJ4 267 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 MARCH3Q86UD3 253 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 STK32CQ86UX6 486 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 PTGR2Q8N8N7 351 aaPredicted RBP13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 OR10D3Q8NH80 312 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 TRPC4APQ8TEL6 797 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 DUSP19Q8WTR2 217 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 EXOSC8Q96B26 276 aaKnown RBP13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 PHF21BQ96EK2 531 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 KCNK17Q96T54 332 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 HBEGFQ99075 208 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 RHNO1Q9BSD3 238 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 ALG2Q9H553 416 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 ELOVL6Q9H5J4 265 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 SDHAF3Q9NRP4 125 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 SENP1Q9P0U3 644 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 VDAC3Q9Y277 283 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 UTP11Q9Y3A2 253 aaKnown RBP13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 TNPO3Q9Y5L0 923 aaKnown RBP13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 AP4B1Q9Y6B7 739 aa13.06□□□□□ -0.32
CCDC144NL-202ENST00000539177 LINC01387J3KSC0 135 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 CXCL13O43927 109 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 FADS1O60427 444 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 PDYNP01213 254 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 PSMB1P20618 241 aaKnown RBP13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 FAM83EQ2M2I3 478 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 TMEM249Q2WGJ8 235 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 C8orf74Q6P047 294 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 FIGNL1Q6PIW4 674 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 RPS27LQ71UM5 84 aaKnown RBP13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 C1orf52Q8N6N3 182 aaKnown RBP13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 OR7G2Q8NG99 324 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 OR4F6Q8NGB9 312 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 MTBPQ96DY7 904 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 TRAF4Q9BUZ4 470 aaPredicted RBP13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 RAB17Q9H0T7 212 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 DPH5Q9H2P9 285 aa13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 ESRP2Q9H6T0 727 aaKnown RBP13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 MCTS1Q9ULC4 181 aaKnown RBP13.05□□□□□ -0.32
CCDC144NL-202ENST00000539177 A0A096LNT2 108 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 FAM234BA2RU67 622 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 TNFSF11O14788 317 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 SYNGR4O95473 234 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 CD8AP01732 235 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 C2P06681 752 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 TUBBP07437 444 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 THBS1P07996 1170 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 IL3P08700 152 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 ZNF16P17020 682 aaPredicted RBP13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 IL11P20809 199 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 IL32P24001 234 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 AGTR1P30556 359 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 NUDT6P53370 316 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 CASP9P55211 416 aa13.04□□□□□ -0.32
CCDC144NL-202ENST00000539177 PSG6Q00889 435 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms