RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 SH3GL2Q99962 352 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 RTN4RQ9BZR6 473 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 ACSS1Q9NUB1 689 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-202ENST00000538809 SH3BP4Q9P0V3 963 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 ATP6V1HQ9UI12 483 aa13.58□□□□□ -0.24
RAB40B-202ENST00000538809 HRNRQ86YZ3 2850 aaPredicted RBP13.58□□□□□ -0.24
RAB40B-202ENST00000538809 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 EEF1E1-BLOC1S5C9J1V9 151 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 EEF1E1O43324 174 aaKnown RBP13.57□□□□□ -0.24
RAB40B-202ENST00000538809 FADS1O60427 444 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 PEX11AO75192 247 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 ZWINTO95229 277 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 SERPINE1P05121 402 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 GABRA3P34903 492 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 LHX2P50458 406 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 PRKAG1P54619 331 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 SF3B4Q15427 424 aaKnown RBP eCLIP13.57□□□□□ -0.24
RAB40B-202ENST00000538809 CYP27C1Q4G0S4 372 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 EXOSC6Q5RKV6 272 aaKnown RBP13.57□□□□□ -0.24
RAB40B-202ENST00000538809 ENPP6Q6UWR7 440 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 LRIG3Q6UXM1 1119 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 GALNT10Q86SR1 603 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 OR2M3Q8NG83 312 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 ZFP28Q8NHY6 868 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 GIMAP5Q96F15 307 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 RMND5BQ96G75 393 aaPredicted RBP13.57□□□□□ -0.24
RAB40B-202ENST00000538809 SORT1Q99523 831 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 C1orf50Q9BV19 199 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 C20orf27Q9GZN8 174 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 DSN1Q9H410 356 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 ZNF395Q9H8N7 513 aaPredicted RBP13.57□□□□□ -0.24
RAB40B-202ENST00000538809 CALHM2Q9HA72 323 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 HAO1Q9UJM8 370 aa13.57□□□□□ -0.24
RAB40B-202ENST00000538809 CLCA1A8K7I4 914 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 TMEM114B3SHH9 223 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 SCAMP2O15127 329 aaKnown RBP13.56□□□□□ -0.24
RAB40B-202ENST00000538809 GMFGO60234 142 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 ZIC3O60481 467 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 UTS2O95399 124 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 IL33O95760 270 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 IGKV1D-16P01601 117 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 TMIGD3P0DMS9 266 aaPredicted RBP13.56□□□□□ -0.24
RAB40B-202ENST00000538809 PRPS2P11908 318 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 CPN1P15169 458 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 CAPN3P20807 821 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 CTSSP25774 331 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 MAPK1P28482 360 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 DGKQP52824 942 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 MANFP55145 182 aaKnown RBP13.56□□□□□ -0.24
RAB40B-202ENST00000538809 CLDN18P56856 261 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 MLC1Q15049 377 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 CHI3L2Q15782 390 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 ATP6AP1LQ52LC2 224 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 AAGABQ6PD74 315 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 CROCCP2Q86T23 111 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 MARCH3Q86UD3 253 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 ZNF781Q8N8C0 355 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 FADS6Q8N9I5 356 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 NUP43Q8NFH3 380 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 ZPLD1Q8TCW7 415 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 NRGNQ92686 78 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 RNASE6Q93091 150 aaKnown RBP13.56□□□□□ -0.24
RAB40B-202ENST00000538809 ZBTB9Q96C00 473 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 ZBED6CLQ96FA7 236 aaPredicted RBP13.56□□□□□ -0.24
RAB40B-202ENST00000538809 OTUB1Q96FW1 271 aaPredicted RBP13.56□□□□□ -0.24
RAB40B-202ENST00000538809 G6PC3Q9BUM1 346 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 SIRT3Q9NTG7 399 aaPredicted RBP13.56□□□□□ -0.24
RAB40B-202ENST00000538809 MED11Q9P086 117 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 ABCG2Q9UNQ0 655 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 HEATR5AQ86XA9 2040 aa13.56□□□□□ -0.24
RAB40B-202ENST00000538809 WDR91A4D1P6 747 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 TTC36A6NLP5 189 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 NKX2-2O95096 273 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 ACP2P11117 423 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 ZNF708P17019 499 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 HK1P19367 917 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 HPCAL1P37235 193 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 KIR2DL3P43628 341 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 DSCR4P56555 118 aaPredicted RBP13.55□□□□□ -0.24
RAB40B-202ENST00000538809 B3GALT5-AS1P59052 145 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 ABCE1P61221 599 aaKnown RBP13.55□□□□□ -0.24
RAB40B-202ENST00000538809 FOXF2Q12947 444 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 PTGR1Q14914 329 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 GRAMD1BQ3KR37 738 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 RAET1LQ5VY80 246 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 R3HCC1LQ7Z5L2 792 aaKnown RBP13.55□□□□□ -0.24
RAB40B-202ENST00000538809 RIMKLAQ8IXN7 391 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 UBQLNLQ8IYU4 475 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 GCNT2Q8N0V5 402 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 OR7A2PQ8NGA2 310 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 OR5M1Q8NGP8 315 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 GPR151Q8TDV0 419 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 SLC9A6Q92581 669 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 DTNBP1Q96EV8 351 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 MS4A4EQ96PG1 132 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 YIPF4Q9BSR8 244 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 SLC24A3Q9HC58 644 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 FAM120CQ9NX05 1096 aaKnown RBP13.55□□□□□ -0.24
RAB40B-202ENST00000538809 ASIC5Q9NY37 505 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 CRIM1Q9NZV1 1036 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms