RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 KNDC1Q76NI1 1749 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 C9J4A7 227 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 ADM5C9JUS6 153 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 CACNG3O60359 315 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 C1QBP02746 253 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 INHAP05111 366 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 BMP4P12644 408 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 ODF4Q2M2E3 257 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 PLK5Q496M5 336 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 FAM205BPQ63HN1 556 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 RBMS3Q6XE24 437 aaKnown RBP6.56□□□□□ -1.36
SORT1-209ENST00000538502 RPS27LQ71UM5 84 aaKnown RBP6.56□□□□□ -1.36
SORT1-209ENST00000538502 CBLL1Q75N03 491 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 FAM124AQ86V42 546 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 OR4M1Q8NGD0 313 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 SCAMP5Q8TAC9 235 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 WDR20Q8TBZ3 569 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 ASB17Q8WXJ9 295 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 TMEM19Q96HH6 336 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 SLCO5A1Q9H2Y9 848 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 METTL7AQ9H8H3 244 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 WRAP73Q9P2S5 460 aaPredicted RBP6.56□□□□□ -1.36
SORT1-209ENST00000538502 LSM5Q9Y4Y9 91 aaKnown RBP6.56□□□□□ -1.36
SORT1-209ENST00000538502 GRXCR1A8MXD5 290 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 TO15178 435 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 APBB3O95704 486 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 PLGP00747 810 aaPredicted RBP6.56□□□□□ -1.36
SORT1-209ENST00000538502 ALPLP05186 524 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 TFAP2AP05549 437 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 SNRNP70P08621 437 aaKnown RBP6.56□□□□□ -1.36
SORT1-209ENST00000538502 ACP5P13686 325 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 RAB4AP20338 218 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 RAB6AP20340 208 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 GIFP27352 417 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 S100A7P31151 101 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 RAB4BP61018 213 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 PSPHP78330 225 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 IL13RA1P78552 427 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 HBMQ6B0K9 141 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 GPR139Q6DWJ6 353 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 SERINC5Q86VE9 423 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 KLHDC8BQ8IXV7 354 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 GGHQ92820 318 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 DDIT4LQ96D03 193 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 C1QTNF2Q9BXJ5 285 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 DNAJC5Q9H3Z4 198 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 FZD3Q9NPG1 666 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 BAZ2BQ9UIF8 2168 aaKnown RBP6.56□□□□□ -1.36
SORT1-209ENST00000538502 SDC3O75056 442 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 MED6O75586 246 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 CRTAPO75718 401 aaPredicted RBP6.56□□□□□ -1.36
SORT1-209ENST00000538502 GABRA3P34903 492 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 NRLP54845 237 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 TSSK4Q6SA08 328 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 LARP4Q71RC2 724 aaKnown RBP eCLIP6.56□□□□□ -1.364e-8■■■□□ 16.7
SORT1-209ENST00000538502 S100A7AQ86SG5 101 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 ISCA2Q86U28 154 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 DNAAF1Q8NEP3 725 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 PCDHGA5Q9Y5G8 931 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 DLG5Q8TDM6 1919 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 BLACEA4D250 179 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 NPIPA2E9PIF3 369 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 NPIPA3F8WFD2 350 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 SEC14L5O43304 696 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 MAFKO60675 156 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 UBL4AP11441 157 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 SOX3P41225 446 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 UBE2KP61086 200 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 ACTR1AP61163 376 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 SRPXP78539 464 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 TMEM115Q12893 351 aaPredicted RBP6.56□□□□□ -1.36
SORT1-209ENST00000538502 RGMBQ6NW40 437 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 LEG1Q6P5S2 330 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 PGM2L1Q6PCE3 622 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 MEPCEQ7L2J0 689 aaKnown RBP6.56□□□□□ -1.36
SORT1-209ENST00000538502 ZNF454Q8N9F8 522 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 ANKRD53Q8N9V6 530 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 FUBP1Q96AE4 644 aaKnown RBP6.56□□□□□ -1.36
SORT1-209ENST00000538502 FAM83CQ9BQN1 747 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 GAREM1Q9H706 876 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 PRTFDC1Q9NRG1 225 aa6.56□□□□□ -1.36
SORT1-209ENST00000538502 RPS10-NUDT3A0A1W2PQS6 291 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 ANKRD34BA5PLL1 514 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 TMEM200CA6NKL6 621 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 H7C1Q1 480 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 ADH5P11766 374 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 ZNF43P17038 809 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 RPS10P46783 165 aaKnown RBP6.55□□□□□ -1.36
SORT1-209ENST00000538502 RNF144AP50876 292 aaPredicted RBP6.55□□□□□ -1.36
SORT1-209ENST00000538502 TAS2R30P59541 319 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 MFGE8Q08431 387 aaPredicted RBP6.55□□□□□ -1.36
SORT1-209ENST00000538502 PLA2G7Q13093 441 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 ACSM3Q53FZ2 586 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 TREML2Q5T2D2 321 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 GKN2Q86XP6 184 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 SLC35F3Q8IY50 421 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 SEMA6DQ8NFY4 1073 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 FRZBQ92765 325 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 MARC2Q969Z3 335 aa6.55□□□□□ -1.36
SORT1-209ENST00000538502 SORCS2Q96PQ0 1159 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms