RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 KLHL22Q53GT1 634 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 C3orf38Q5JPI3 329 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 CCNJQ5T5M9 372 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 ZNF438Q7Z4V0 828 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 ZNF554Q86TJ5 538 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 CYP4Z2PQ8N1L4 340 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 ZNF619Q8N2I2 560 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 ARHGEF39Q8N4T4 335 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 MINDY2Q8NBR6 621 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 PMM1Q92871 262 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 OSTF1Q92882 214 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 CTHRC1Q96CG8 243 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 FAM46AQ96IP4 442 aaKnown RBP10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 ORAI3Q9BRQ5 295 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 GPR174Q9BXC1 333 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 POLR2J2Q9GZM3 115 aaKnown RBP10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 SEMA6CQ9H3T2 930 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 FGF20Q9NP95 211 aaPredicted RBP10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 IL20Q9NYY1 176 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 MAT2BQ9NZL9 334 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 POMT2Q9UKY4 750 aa10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 NDRG2Q9UN36 371 aaKnown RBP10.64□□□□□ -0.71
SLC28A1-204ENST00000538177 CENPVL1A0A0U1RR11 272 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 IRGMA1A4Y4 181 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 SNTNA6NMZ2 147 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 DBIP07108 87 aaKnown RBP10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 BLKP51451 505 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 RAB38P57729 211 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 RPS3AP61247 264 aaKnown RBP10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 MLLT1Q03111 559 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 RAB40BQ12829 278 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 MAP4K2Q12851 820 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 MLLT11Q13015 90 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 C1orf61Q13536 156 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 MAPK14Q16539 360 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 TRIM16LQ309B1 348 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 DCST2Q5T1A1 773 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 NIPAL1Q6NVV3 410 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 SLC36A4Q6YBV0 504 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 ZNF761Q86XN6 746 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 CACTIN-AS1Q8N1I8 211 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 POGLUT1Q8NBL1 392 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 ANKRD9Q96BM1 317 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 SLC38A2Q96QD8 506 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 GAS2L1Q99501 681 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 PRRG3Q9BZD7 231 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 FAM60AQ9NP50 221 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 NLGN3Q9NZ94 848 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 SEC14L4Q9UDX3 406 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 CFL2Q9Y281 166 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 FUOMA2VDF0 154 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 KDM4EB2RXH2 506 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 HCRTR1O43613 425 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 AK1P00568 194 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 NID1P14543 1247 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 ST6GAL1P15907 406 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 SOX3P41225 446 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 CRYBB2P43320 205 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 PRKCDQ05655 676 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 C1DQ13901 141 aaKnown RBP10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 GPR68Q15743 365 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 MINDY4Q4G0A6 757 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 PERM1Q5SV97 790 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 ARMC6Q6NXE6 501 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 PAQR6Q6TCH4 344 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 NRMQ8IXM6 262 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 COX18Q8N8Q8 333 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 FAM174AQ8TBP5 190 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 DOK4Q8TEW6 326 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 ZDHHC1Q8WTX9 485 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 TMEM255BQ8WV15 326 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 SNRNP27Q8WVK2 155 aaKnown RBP10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 HOXB13Q92826 284 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 KLHDC7BQ96G42 594 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 CCDC3Q9BQI4 270 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 C6orf62Q9GZU0 229 aaPredicted RBP10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 SIAEQ9HAT2 523 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 STARD5Q9NSY2 213 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 NDUFB11Q9NX14 153 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 DAPK2Q9UIK4 370 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 KCNE5Q9UJ90 142 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 KNL1Q8NG31 2342 aa10.63□□□□□ -0.71
SLC28A1-204ENST00000538177 SGK494L7N484 410 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 MYL12BO14950 172 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 CT62P0C5K7 136 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 SLC35E2P0CK97 266 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 GNSP15586 552 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 TYRP1P17643 537 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 SOX6P35712 828 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 ETV5P41161 510 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 ETV1P50549 477 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 BCAP31P51572 246 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 ZNF620Q6ZNG0 422 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 SYT13Q7L8C5 426 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 RANBP3LQ86VV4 465 aaPredicted RBP10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 PARGQ86W56 976 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 SNX29P2Q8IUI4 249 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 TDHQ8IZJ6 230 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 CLDN22Q8N7P3 220 aa10.62□□□□□ -0.71
SLC28A1-204ENST00000538177 ANKK1Q8NFD2 765 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms