RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 ADAP00813 363 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ADORA3P0DMS8 318 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ACP1P24666 158 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 IDH2P48735 452 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 DUSP3P51452 185 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PPP5CP53041 499 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 CDC42P60953 191 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SHC2P98077 582 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 CDC20Q12834 499 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SELENBP1Q13228 472 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SQSTM1Q13501 440 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PTGES3Q15185 160 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SYT16Q17RD7 645 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ZNF750Q32MQ0 723 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 COLEC12Q5KU26 742 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 C19orf48Q6RUI8 117 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 CEACAM20Q6UY09 585 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 USP43Q70EL4 1123 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 LACC1Q8IV20 430 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 TMEM52Q8NDY8 209 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SRFBP1Q8NEF9 429 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 TMEM121BQ9BXQ6 578 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 TAS2R7Q9NYW3 318 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 HCN3Q9P1Z3 774 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 HYKKA2RU49 373 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 TAF4O00268 1085 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 PDPK1O15530 556 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 FOXS1O43638 330 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 B3GALT2O43825 422 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 TIAF1O95411 115 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 GASTP01350 101 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 STSP08842 583 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 PIPP12273 146 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CHMP24386 653 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 GADD45AP24522 165 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SLC15A1P46059 708 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 GSSP48637 474 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CLK1P49759 484 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CRISP1P54107 249 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 LIM2P55344 173 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 TRA2BP62995 288 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 MAT1AQ00266 395 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 DUSP2Q05923 314 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 TGM3Q08188 693 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 MAPK11Q15759 364 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ZNF404Q494X3 552 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 KLHL17Q6TDP4 642 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ZNF367Q7RTV3 350 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CARFQ8N187 725 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 STX19Q8N4C7 294 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 HORMAD2Q8N7B1 307 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SLC38A5Q8WUX1 472 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ZNF501Q96CX3 271 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CTRCQ99895 268 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CHRNA10Q9GZZ6 450 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 NMNAT1Q9HAN9 279 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SIRT3Q9NTG7 399 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ACSS1Q9NUB1 689 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 IMPAD1Q9NX62 359 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 KCMF1Q9P0J7 381 aa12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 DHCR7Q9UBM7 475 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDK5RAP3-202ENST00000536708 URADA6NGE7 173 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 FFAR1O14842 300 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SRPX2O60687 465 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ANKRD34CP0C6C1 535 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 TSFMP43897 325 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 MANFP55145 182 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ST3GAL4Q11206 333 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ILKQ13418 452 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SLC44A2Q8IWA5 706 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 AQP11Q8NBQ7 271 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 GPR32P1Q8NGA4 272 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 MCFD2Q8NI22 146 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 RASSF5Q8WWW0 418 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SERINC2Q96SA4 455 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 PRRX2Q99811 253 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SP140LQ9H930 580 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 APMAPQ9HDC9 416 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 POLE4Q9NR33 117 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 MS4A12Q9NXJ0 267 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 GPR83Q9NYM4 423 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 CCDC59Q9P031 241 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ZNF229Q9UJW7 825 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ACAD8Q9UKU7 415 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 DAPP1Q9UN19 280 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 UGT2A1Q9Y4X1 527 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SLC22A7Q9Y694 548 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 MAU2Q9Y6X3 613 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ISPDA4D126 451 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 FAM227AF5H4B4 570 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 PROM1O43490 865 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 C8orf89P0DMQ9 161 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 NR2F6P10588 404 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 ARFIP1P53367 373 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 TPTEP56180 551 aa12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SNRPGP62308 76 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 SIM1P81133 766 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-202ENST00000536708 TNFRSF17Q02223 184 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms