RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 GPR171O14626 319 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 SOX14O95416 240 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 ZNF8P17098 575 aaPredicted RBP13.13□□□□□ -0.31
LIG1-203ENST00000536218 RBBP4Q09028 425 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 CNTN1Q12860 1018 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 GANABQ14697 944 aaKnown RBP13.13□□□□□ -0.31
LIG1-203ENST00000536218 PDSS1Q5T2R2 415 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 SFRP5Q5T4F7 317 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 LAPTM4BQ86VI4 370 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 ZNF480Q8WV37 535 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 SAMD11Q96NU1 681 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 SLC38A2Q96QD8 506 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 KXD1Q9BQD3 176 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 DLL4Q9NR61 685 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 PTTG3PQ9NZH4 202 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 OR6C2Q9NZP2 312 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 PHF11Q9UIL8 331 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 TMEM5Q9Y2B1 443 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 LSM2Q9Y333 95 aaKnown RBP13.13□□□□□ -0.31
LIG1-203ENST00000536218 EEF1E1O43324 174 aaKnown RBP13.13□□□□□ -0.31
LIG1-203ENST00000536218 SIGLEC6O43699 453 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 PCCBP05166 539 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 PRPS2P11908 318 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 COX7A2P14406 83 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 NCF4Q15080 339 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 NHLRC3Q5JS37 347 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 CHCHD4Q8N4Q1 142 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 C1orf52Q8N6N3 182 aaKnown RBP13.13□□□□□ -0.31
LIG1-203ENST00000536218 CXorf40AQ8TE69 158 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 C2CD4CQ8TF44 421 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 KCNJ15Q99712 375 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 SLC19A3Q9BZV2 496 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 RHCGQ9UBD6 479 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 GPR160Q9UJ42 338 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 SH2B3Q9UQQ2 575 aa13.13□□□□□ -0.31
LIG1-203ENST00000536218 TRBV23-1A0A0A0MS06 115 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 A0A0G2JPF8 293 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 HNRNPCL3B7ZW38 293 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 NMBP08949 121 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 HNRNPCL4P0DMR1 293 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 KIR3DL1P43629 444 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 GGTA1PQ4G0N0 100 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 IER5LQ5T953 404 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 CD276Q5ZPR3 534 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 TMEM88Q6PEY1 159 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 ERN2Q76MJ5 926 aaKnown RBP13.12□□□□□ -0.31
LIG1-203ENST00000536218 SLC16A13Q7RTY0 426 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 CLECL1Q8IZS7 167 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 PLA2G2FQ9BZM2 168 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 GNG14A0A1W2PPG7 69 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 SH3D21A4FU49 640 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 A8MXK9 166 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 J3KTA2 159 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 L7N2F9 121 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 C1orf105O95561 183 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 ALDH9A1P49189 494 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 TBPL1P62380 186 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 PLA1AQ53H76 456 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 LIPJQ5W064 366 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 VITQ6UXI7 678 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 TMEM91Q6ZNR0 172 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 ZNF547Q8IVP9 402 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 YAF2Q8IY57 180 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 NRSN1Q8IZ57 195 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 ZNF454Q8N9F8 522 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 BVESQ8NE79 360 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 TMEM163Q8TC26 289 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 SCMH1Q96GD3 660 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 PRR14Q9BWN1 585 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 PBX4Q9BYU1 374 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 ENAMQ9NRM1 1142 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 TM7SF3Q9NS93 570 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 TINAGQ9UJW2 476 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 ASF1AQ9Y294 204 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 GSTK1Q9Y2Q3 226 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 IGLON5A6NGN9 336 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 E9PQ18 207 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 FPGTO14772 594 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 NPC1O15118 1278 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 SCAMP1O15126 338 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 LINC01565O15544 149 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 GATBO75879 557 aaKnown RBP13.12□□□□□ -0.31
LIG1-203ENST00000536218 ECDO95905 644 aaPredicted RBP13.12□□□□□ -0.31
LIG1-203ENST00000536218 SEMG1P04279 462 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 GJA4P35212 333 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 P2RY2P41231 377 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 RPS13P62277 151 aaKnown RBP13.12□□□□□ -0.31
LIG1-203ENST00000536218 KCNJ10P78508 379 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 WASH2PQ6VEQ5 465 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 AQP11Q8NBQ7 271 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 TMIEQ8NEW7 156 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 HUS1BQ8NHY5 278 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 PPP1R16AQ96I34 528 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 THAP7Q9BT49 309 aaPredicted RBP13.12□□□□□ -0.31
LIG1-203ENST00000536218 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 NDUFAF4Q9P032 175 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 CTSFQ9UBX1 484 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 SCP2D1Q9UJQ7 156 aa13.12□□□□□ -0.31
LIG1-203ENST00000536218 GABRR3A8MPY1 467 aa13.11□□□□□ -0.31
LIG1-203ENST00000536218 FAM227AF5H4B4 570 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms