RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 MATN1P21941 496 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 GDF1P27539 372 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 MDH1P40925 334 aaKnown RBP20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 UBAP2LQ14157 1087 aaKnown RBP20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 C3AR1Q16581 482 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 GRAMD1BQ3KR37 738 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 C4orf17Q53FE4 359 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 C1QL3Q5VWW1 255 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 CGB2Q6NT52 195 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 ARHGAP11AQ6P4F7 1023 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 MSANTD1Q6ZTZ1 278 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 FUNDC1Q8IVP5 155 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 OR5D16Q8NGK9 328 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 MIPOL1Q8TD10 442 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 NEURL3Q96EH8 262 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 SLC35G5Q96KT7 338 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 PANX1Q96RD7 426 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 SLC35A5Q9BS91 424 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 ERRFI1Q9UJM3 462 aaPredicted RBP20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 SLC5A6Q9Y289 635 aa20.74■□□□□ 0.91
SFSWAP-204ENST00000535399 A0A0G2JND7 137 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 C17orf51A8MQB3 221 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 B4DXG7 233 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 SCO2O43819 266 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 VIMP08670 466 aaKnown RBP20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 LCN1P31025 176 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 PTGS2P35354 604 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 CA7P43166 264 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 IRX1P78414 480 aaPredicted RBP20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 SQLEQ14534 574 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 TIGD2Q4W5G0 525 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 OR4C3Q8NH37 302 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 RELTQ969Z4 430 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 VPS33AQ96AX1 596 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 SLC6A15Q9H2J7 730 aa20.73■□□□□ 0.91
SFSWAP-204ENST00000535399 TRGV5A0A0B4J1U4 118 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 TRGV8A0A0C4DH27 118 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 DYNC1I1O14576 645 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 LRRTM2O43300 516 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 SUSD5O60279 629 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 HCN1O60741 890 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 AGFG2O95081 481 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 ZIC2O95409 532 aaPredicted RBP20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 HPNP05981 417 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 GSNP06396 782 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 NGFRP08138 427 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 ABOP16442 354 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 ENDOUP21128 410 aaKnown RBP20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 CASP9P55211 416 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 RCAN2Q14206 197 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 DCST2Q5T1A1 773 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 APOOLQ6UXV4 268 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 ZNF621Q6ZSS3 439 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 PLCZ1Q86YW0 608 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 G6PC3Q9BUM1 346 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 ZNF385DQ9H6B1 395 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 TINAGQ9UJW2 476 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 FBXL2Q9UKC9 423 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 PCDHGB3Q9Y5G1 929 aa20.72■□□□□ 0.91
SFSWAP-204ENST00000535399 A0A1B0GUH1 482 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 DUXAA6NLW8 204 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 AQP7O14520 342 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 RFXANKO14593 260 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 TRAPPC6AO75865 159 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 OXSR1O95747 527 aaPredicted RBP20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 TROVE2P10155 538 aaKnown RBP eCLIP20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 TBXA2RP21731 343 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 CHI3L1P36222 383 aaPredicted RBP20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 OR5M10Q6IEU7 315 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 BLOC1S3Q6QNY0 202 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 MARCH3Q86UD3 253 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 TRIML2Q8N7C3 387 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 FAM57AQ8TBR7 257 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 ITCHQ96J02 903 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 ZNF317Q96PQ6 595 aaPredicted RBP20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 TMEM120AQ9BXJ8 343 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 OR51I1Q9H343 314 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 LDAHQ9H6V9 325 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 RMND5AQ9H871 391 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 SLC52A3Q9NQ40 469 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 SLC6A13Q9NSD5 602 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 TMEM45AQ9NWC5 275 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 SPRR3Q9UBC9 169 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 ZNF407Q9C0G0 2248 aa20.71■□□□□ 0.91
SFSWAP-204ENST00000535399 ALG1L2C9J202 215 aa20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 CBR3O75828 277 aa20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 RNF224P0DH78 156 aa20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 CD1EP15812 388 aa20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 TRPC1P48995 793 aa20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 CASP6P55212 293 aa20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 AGKQ53H12 422 aa20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 EIPR1Q53HC9 387 aa20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 TNFAIP8L2Q6P589 184 aaPredicted RBP20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 DNAJC14Q6Y2X3 702 aaPredicted RBP20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 FJX1Q86VR8 437 aa20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 DOLPP1Q86YN1 238 aa20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 FADS6Q8N9I5 356 aa20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 CHDHQ8NE62 594 aaPredicted RBP20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 NEIL3Q8TAT5 605 aa20.7■□□□□ 0.9
SFSWAP-204ENST00000535399 PHF12Q96QT6 1004 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms