RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 NKX2-2O95096 273 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 PRPS2P11908 318 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 CAPN3P20807 821 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 BMP5P22003 454 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 CHMP24386 653 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 DPP4P27487 766 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 GABRA3P34903 492 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 CLDN18P56856 261 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 MLC1Q15049 377 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 ZNHIT3Q15649 155 aaPredicted RBP12.74□□□□□ -0.37
SF3B2-215ENST00000534307 C6orf136Q5SQH8 315 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 LRIG3Q6UXM1 1119 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 C9orf106Q8NAJ2 232 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 OR2M3Q8NG83 312 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 ZFP28Q8NHY6 868 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 PIK3R3Q92569 461 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 TRIB1Q96RU8 372 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 SSU72Q9NP77 194 aaKnown RBP12.74□□□□□ -0.37
SF3B2-215ENST00000534307 EQTNQ9NQ60 294 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 SH3BP4Q9P0V3 963 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 CLCF1Q9UBD9 225 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 PRRC2AP48634 2157 aaKnown RBP12.74□□□□□ -0.37
SF3B2-215ENST00000534307 PCNX3Q9H6A9 2034 aa12.74□□□□□ -0.37
SF3B2-215ENST00000534307 ABCA4P78363 2273 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 TMEM114B3SHH9 223 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 DVL2O14641 736 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 SCAMP2O15127 329 aaKnown RBP12.73□□□□□ -0.37
SF3B2-215ENST00000534307 SCO2O43819 266 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 PEX11AO75192 247 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 IL2RAP01589 272 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 DHRS4L1P0CG22 281 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 ACP2P11117 423 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 LAMP1P11279 417 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 ZNF708P17019 499 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 GPC1P35052 558 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 GCKP35557 465 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 STARP49675 285 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 ASCL1P50553 236 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 MANFP55145 182 aaKnown RBP12.73□□□□□ -0.37
SF3B2-215ENST00000534307 DSCR4P56555 118 aaPredicted RBP12.73□□□□□ -0.37
SF3B2-215ENST00000534307 PRR5P85299 388 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 RCAN2Q14206 197 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 PTGR1Q14914 329 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 MFSD12Q6NUT3 480 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 AAGABQ6PD74 315 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 ENPP6Q6UWR7 440 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 APOOLQ6UXV4 268 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 R3HCC1LQ7Z5L2 792 aaKnown RBP12.73□□□□□ -0.37
SF3B2-215ENST00000534307 EXOC3L1Q86VI1 746 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 CDRT4Q8N9R6 151 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 NUP43Q8NFH3 380 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 CEP70Q8NHQ1 597 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 PSMA8Q8TAA3 256 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 FAM110BQ8TC76 370 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 DTNBP1Q96EV8 351 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 PKNOX2Q96KN3 472 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 MS4A4EQ96PG1 132 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 DSN1Q9H410 356 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 SLC24A3Q9HC58 644 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 JKAMPQ9P055 326 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 PPP4R1LQ9P1A2 415 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 DKKL1Q9UK85 242 aa12.73□□□□□ -0.37
SF3B2-215ENST00000534307 MRTO4Q9UKD2 239 aaKnown RBP12.73□□□□□ -0.37
SF3B2-215ENST00000534307 H0Y3Z8 333 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 RGS16O15492 202 aaPredicted RBP12.72□□□□□ -0.37
SF3B2-215ENST00000534307 CTIFO43310 598 aaKnown RBP12.72□□□□□ -0.37
SF3B2-215ENST00000534307 HCRTR2O43614 444 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 ITM2AO43736 263 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 SKAP2O75563 359 aaPredicted RBP12.72□□□□□ -0.37
SF3B2-215ENST00000534307 LYPLA1O75608 230 aaPredicted RBP12.72□□□□□ -0.37
SF3B2-215ENST00000534307 UTS2O95399 124 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 IL18BPO95998 194 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 SERPINE1P05121 402 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 NGFRP08138 427 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 EFNA1P20827 205 aaPredicted RBP12.72□□□□□ -0.37
SF3B2-215ENST00000534307 CTSSP25774 331 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 MAPK1P28482 360 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 HPCAL1P37235 193 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 PSMD4P55036 377 aaKnown RBP12.72□□□□□ -0.37
SF3B2-215ENST00000534307 MPP2Q14168 576 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 GANABQ14697 944 aaKnown RBP12.72□□□□□ -0.37
SF3B2-215ENST00000534307 BCL2A1Q16548 175 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 VPS26BQ4G0F5 336 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 ATP6AP1LQ52LC2 224 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 ARSKQ6UWY0 536 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 ZAR1Q86SH2 424 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 MARCH3Q86UD3 253 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 NUDCD3Q8IVD9 361 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 RIMKLAQ8IXN7 391 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 SLC16A11Q8NCK7 471 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 OR7A2PQ8NGA2 310 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 OR4K17Q8NGC6 315 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 GPR151Q8TDV0 419 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 NUDT8Q8WV74 236 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 FAM120BQ96EK7 910 aaKnown RBP12.72□□□□□ -0.37
SF3B2-215ENST00000534307 C1GALT1C1Q96EU7 318 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 RMND5BQ96G75 393 aaPredicted RBP12.72□□□□□ -0.37
SF3B2-215ENST00000534307 SFXN2Q96NB2 322 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 C1orf50Q9BV19 199 aa12.72□□□□□ -0.37
SF3B2-215ENST00000534307 ZNF395Q9H8N7 513 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms