RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 PCSK4Q6UW60 755 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 ZNF227Q86WZ6 799 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 C10orf111Q8N326 155 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 GOLM1Q8NBJ4 401 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 OR8J3Q8NGG0 315 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 FBXO27Q8NI29 283 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 NFKBIDQ8NI38 313 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 SPPL2AQ8TCT8 520 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 HGDQ93099 445 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 HOPXQ9BPY8 73 aaPredicted RBP16.03■□□□□ 0.16
NXF1-216ENST00000533499 THUMPD1Q9NXG2 353 aaKnown RBP16.03■□□□□ 0.16
NXF1-216ENST00000533499 ADA2Q9NZK5 511 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 LIPT1Q9Y234 373 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 KLF13Q9Y2Y9 288 aaPredicted RBP16.03■□□□□ 0.16
NXF1-216ENST00000533499 WDR45Q9Y484 360 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 ATRXP46100 2492 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 NINQ8N4C6 2090 aa16.03■□□□□ 0.16
NXF1-216ENST00000533499 C15orf38-AP3S2A0A0A6YYH1 394 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 PRAMEF27A3QJZ7 478 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 PEX1O43933 1283 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 FCMRO60667 390 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 H6PDO95479 791 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 GPX2P18283 190 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 SLC6A2P23975 617 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 MAGEA8P43361 318 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 MASP1P48740 699 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 DNASE1L1P49184 302 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 CHRNEQ04844 493 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 NFATC3Q12968 1075 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 PLEKHN1Q494U1 663 aaPredicted RBP16.02■□□□□ 0.16
NXF1-216ENST00000533499 RPS26P11Q5JNZ5 115 aaPredicted RBP16.02■□□□□ 0.16
NXF1-216ENST00000533499 HEPHL1Q6MZM0 1159 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 C16orf89Q6UX73 402 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 HACD2Q6Y1H2 254 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 Q6ZS92 163 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 ARPINQ7Z6K5 226 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 GATSQ8NAP1 163 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 CHDHQ8NE62 594 aaPredicted RBP16.02■□□□□ 0.16
NXF1-216ENST00000533499 FAM110BQ8TC76 370 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 WBP1Q96G27 269 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 TMEM19Q96HH6 336 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 DOHHQ9BU89 302 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 TBL1XR1Q9BZK7 514 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 TRIM45Q9H8W5 580 aaPredicted RBP16.02■□□□□ 0.16
NXF1-216ENST00000533499 CACYBPQ9HB71 228 aaKnown RBP16.02■□□□□ 0.16
NXF1-216ENST00000533499 CNIH4Q9P003 139 aa16.02■□□□□ 0.16
NXF1-216ENST00000533499 CHCHD2Q9Y6H1 151 aaPredicted RBP16.02■□□□□ 0.16
NXF1-216ENST00000533499 A0A0G2JMM0 328 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 A0A1W2PPB8 328 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 A0A1W2PRS3 328 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 KIR3DP1A8MWS1 328 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 SCDO00767 359 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 CDK2AP1O14519 115 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 ATXN7O15265 892 aaPredicted RBP16.01■□□□□ 0.15
NXF1-216ENST00000533499 NME2P1O60361 137 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 TNFRSF21O75509 655 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 CHRM4P08173 479 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 NME2P22392 152 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 RFC3P40938 356 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 MEOX1P50221 254 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 CRISP3P54108 245 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 PLGLB1Q02325 96 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 FUT5Q11128 374 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 KLRB1Q12918 225 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 SCARB2Q14108 478 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 GNA13Q14344 377 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.01■□□□□ 0.15
NXF1-216ENST00000533499 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.01■□□□□ 0.15
NXF1-216ENST00000533499 SULF2Q8IWU5 870 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 FBXW8Q8N3Y1 598 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 FAM98AQ8NCA5 519 aaKnown RBP16.01■□□□□ 0.15
NXF1-216ENST00000533499 PAQR8Q8TEZ7 354 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 SLC38A5Q8WUX1 472 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 TRNT1Q96Q11 434 aaKnown RBP16.01■□□□□ 0.15
NXF1-216ENST00000533499 OSBPL11Q9BXB4 747 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 KAT8Q9H7Z6 458 aaKnown RBP16.01■□□□□ 0.15
NXF1-216ENST00000533499 GALNT9Q9HCQ5 603 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 RYDENQ9NUL5 291 aaKnown RBP16.01■□□□□ 0.15
NXF1-216ENST00000533499 CMTM6Q9NX76 183 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 NDE1Q9NXR1 346 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 PACSIN3Q9UKS6 424 aa16.01■□□□□ 0.15
NXF1-216ENST00000533499 CNOT11Q9UKZ1 510 aaKnown RBP16.01■□□□□ 0.15
NXF1-216ENST00000533499 KLRC4-KLRK1H3BQV0 150 aa16■□□□□ 0.15
NXF1-216ENST00000533499 GNB5O14775 395 aa16■□□□□ 0.15
NXF1-216ENST00000533499 GMFGO60234 142 aa16■□□□□ 0.15
NXF1-216ENST00000533499 TFPTP0C1Z6 253 aa16■□□□□ 0.15
NXF1-216ENST00000533499 CNR1P21554 472 aa16■□□□□ 0.15
NXF1-216ENST00000533499 AQP1P29972 269 aa16■□□□□ 0.15
NXF1-216ENST00000533499 EVI2BP34910 448 aa16■□□□□ 0.15
NXF1-216ENST00000533499 DCTP40126 519 aa16■□□□□ 0.15
NXF1-216ENST00000533499 CASP3P42574 277 aa16■□□□□ 0.15
NXF1-216ENST00000533499 CDK6Q00534 326 aa16■□□□□ 0.15
NXF1-216ENST00000533499 PMP22Q01453 160 aa16■□□□□ 0.15
NXF1-216ENST00000533499 LIPEQ05469 1076 aa16■□□□□ 0.15
NXF1-216ENST00000533499 TYW3Q6IPR3 259 aaKnown RBP16■□□□□ 0.15
NXF1-216ENST00000533499 RINLQ6ZS11 566 aa16■□□□□ 0.15
NXF1-216ENST00000533499 MARCH3Q86UD3 253 aa16■□□□□ 0.15
NXF1-216ENST00000533499 SLC15A3Q8IY34 581 aa16■□□□□ 0.15
NXF1-216ENST00000533499 DEFB107AQ8IZN7 70 aa16■□□□□ 0.15
NXF1-216ENST00000533499 ZNF619Q8N2I2 560 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms