RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 FBN2P35556 2912 aa27.52■■■□□ 2
SSSCA1-207ENST00000533115 DCHS2Q6V1P9 2916 aa27.51■■■□□ 2
SSSCA1-207ENST00000533115 MED12Q93074 2177 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 IGKV1D-16P01601 117 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 G6PDP11413 515 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 CPN1P15169 458 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 IGFBP2P18065 325 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 PRPS1L1P21108 318 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 TIMP3P35625 211 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 CLK3P49761 638 aaKnown RBP27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 RPL14P50914 215 aaKnown RBP27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 GFRA1P56159 465 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 PRR5P85299 388 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 STX3Q13277 289 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 SMU1Q2TAY7 513 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 NSUN5P2Q63ZY6 315 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 MFSD12Q6NUT3 480 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 TRIM42Q8IWZ5 723 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 RIMKLAQ8IXN7 391 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 NATD1Q8N6N6 113 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 FADS6Q8N9I5 356 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 TNIP2Q8NFZ5 429 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 NUDT8Q8WV74 236 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 COQ8BQ96D53 544 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 FAM120BQ96EK7 910 aaKnown RBP27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 PPP1R36Q96LQ0 422 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 PAIP2Q9BPZ3 127 aaKnown RBP27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 ASIC5Q9NY37 505 aa27.51■■□□□ 1.99
SSSCA1-207ENST00000533115 UTS2O95399 124 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 ACP2P11117 423 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 DPP4P27487 766 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 CEACAM8P31997 349 aaPredicted RBP27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 DSCR4P56555 118 aaPredicted RBP27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 WNT3P56703 355 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 SLC25A35Q3KQZ1 300 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 ZCCHC12Q6PEW1 402 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 ENPP6Q6UWR7 440 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 KIRREL3Q8IZU9 778 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 ANKRD42Q8N9B4 389 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 SLC16A11Q8NCK7 471 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 FBXO30Q8TB52 745 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 OR5P2Q8WZ92 322 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 C16orf58Q96GQ5 468 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 TRIB1Q96RU8 372 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 RTN4RQ9BZR6 473 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 DSN1Q9H410 356 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 AKTIPQ9H8T0 292 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 NOP53Q9NZM5 478 aaKnown RBP27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 HAO1Q9UJM8 370 aa27.5■■□□□ 1.99
SSSCA1-207ENST00000533115 CD8B2A6NJW9 211 aa27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 ZIC3O60481 467 aa27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 HHATQ5VTY9 493 aa27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 AAGABQ6PD74 315 aa27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 MARCH3Q86UD3 253 aa27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 NAXEQ8NCW5 288 aa27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 OR2M3Q8NG83 312 aa27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 ZPLD1Q8TCW7 415 aa27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 SFXN2Q96NB2 322 aa27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 CALHM2Q9HA72 323 aa27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 ZCCHC3Q9NUD5 404 aaKnown RBP27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 INTS1Q8N201 2190 aaKnown RBP27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 CSMD1Q96PZ7 3565 aa27.49■■□□□ 1.99
SSSCA1-207ENST00000533115 IL2RAP01589 272 aa27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 PRIM2P49643 509 aa27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 C21orf58P58505 322 aa27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 STX5Q13190 355 aa27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 RCAN2Q14206 197 aa27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 DUSP5Q16690 384 aa27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 BEND6Q5SZJ8 279 aaPredicted RBP27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 PSMA8Q8TAA3 256 aa27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 FAM110BQ8TC76 370 aa27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 DUSP19Q8WTR2 217 aa27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 TBL1XR1Q9BZK7 514 aa27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 BHLHE41Q9C0J9 482 aaPredicted RBP27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 MED11Q9P086 117 aa27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 RPH3AQ9Y2J0 694 aaPredicted RBP27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 SNX8Q9Y5X2 465 aa27.48■■□□□ 1.99
SSSCA1-207ENST00000533115 ALOX5P09917 674 aa27.47■■□□□ 1.99
SSSCA1-207ENST00000533115 CHMP24386 653 aa27.47■■□□□ 1.99
SSSCA1-207ENST00000533115 SSTR2P30874 369 aa27.47■■□□□ 1.99
SSSCA1-207ENST00000533115 DIO3P55073 304 aa27.47■■□□□ 1.99
SSSCA1-207ENST00000533115 CLDN8P56748 225 aa27.47■■□□□ 1.99
SSSCA1-207ENST00000533115 BST1Q10588 318 aa27.47■■□□□ 1.99
SSSCA1-207ENST00000533115 GRAMD1BQ3KR37 738 aa27.47■■□□□ 1.99
SSSCA1-207ENST00000533115 LSM12Q3MHD2 195 aaKnown RBP27.47■■□□□ 1.99
SSSCA1-207ENST00000533115 EXOSC6Q5RKV6 272 aaKnown RBP27.47■■□□□ 1.99
SSSCA1-207ENST00000533115 C14orf79Q96F83 325 aa27.47■■□□□ 1.99
SSSCA1-207ENST00000533115 YIPF4Q9BSR8 244 aa27.47■■□□□ 1.99
SSSCA1-207ENST00000533115 CREBBPQ92793 2442 aa27.47■■□□□ 1.99
SSSCA1-207ENST00000533115 TMEM120BA0PK00 339 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 MBD3L4A6NDZ8 208 aaPredicted RBP27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 MBD3L3A6NE82 208 aaPredicted RBP27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 MBD3L5A6NJ08 208 aaPredicted RBP27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 H0Y3Z8 333 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 KCNK2O95069 426 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 C6orf47O95873 294 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 HMGN2P05204 90 aaKnown RBP27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 TCEA1P23193 301 aaKnown RBP27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 STARP49675 285 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 LHX2P50458 406 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms