RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 VPS29Q9UBQ0 182 aa11.67□□□□□ -0.54
COPB1-209ENST00000533096 DMGDHQ9UI17 866 aaKnown RBP11.67□□□□□ -0.54
COPB1-209ENST00000533096 PCTPQ9UKL6 214 aa11.67□□□□□ -0.54
COPB1-209ENST00000533096 SNX6Q9UNH7 406 aa11.67□□□□□ -0.54
COPB1-209ENST00000533096 VDAC3Q9Y277 283 aa11.67□□□□□ -0.54
COPB1-209ENST00000533096 AP4B1Q9Y6B7 739 aa11.67□□□□□ -0.54
COPB1-209ENST00000533096 MED12Q93074 2177 aa11.67□□□□□ -0.54
COPB1-209ENST00000533096 FREM3P0C091 2139 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 RTTNQ86VV8 2226 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 LINC01387J3KSC0 135 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 CD5LO43866 347 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 CXCL13O43927 109 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 OR4F21O95013 312 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 CD3EP07766 207 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 FCGR2AP12318 317 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 MPIP34949 423 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 TCHHL1Q5QJ38 904 aaPredicted RBP11.66□□□□□ -0.54
COPB1-209ENST00000533096 MFSD12Q6NUT3 480 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 CDC26Q8NHZ8 85 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 ZNF675Q8TD23 568 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 ROBO4Q8WZ75 1007 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 S100PBPQ96BU1 408 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 C1GALT1C1Q96EU7 318 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 TMEM204Q9BSN7 226 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 TBL1XR1Q9BZK7 514 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 TMEM185BQ9H7F4 350 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 SLC35C2Q9NQQ7 365 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 GRHL1Q9NZI5 618 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 STOML1Q9UBI4 398 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 GDF2Q9UK05 429 aaPredicted RBP11.66□□□□□ -0.54
COPB1-209ENST00000533096 GPR52Q9Y2T5 361 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 RNF115Q9Y4L5 304 aa11.66□□□□□ -0.54
COPB1-209ENST00000533096 A0A1W2PP18 115 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 FAM187AA6NFU0 413 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 RAD51CO43502 376 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 SSX4O60224 188 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 OTCP00480 354 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 JUNP05412 331 aaKnown RBP11.65□□□□□ -0.54
COPB1-209ENST00000533096 RBP1P09455 135 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 GABRA3P34903 492 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 TRA2BP62995 288 aaKnown RBP11.65□□□□□ -0.54
COPB1-209ENST00000533096 PSG6Q00889 435 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 C17orf67Q0P5P2 114 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 C2orf80Q0P641 193 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 GUSBP1Q15486 140 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 DECR1Q16698 335 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.65□□□□□ -0.54
COPB1-209ENST00000533096 CYP27C1Q4G0S4 372 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 TECRLQ5HYJ1 363 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 LETMD1Q6P1Q0 360 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 METTL2BQ6P1Q9 378 aaKnown RBP11.65□□□□□ -0.54
COPB1-209ENST00000533096 CCDC91Q7Z6B0 441 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 GALNT10Q86SR1 603 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 WDR75Q8IWA0 830 aaKnown RBP11.65□□□□□ -0.54
COPB1-209ENST00000533096 FAM9CQ8IZT9 166 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 METTL25Q8N6Q8 603 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 CDYL2Q8N8U2 506 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 OR10D3Q8NH80 312 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 C16orf78Q8WTQ4 265 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 SLC9A6Q92581 669 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 OSTF1Q92882 214 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 FBXW5Q969U6 566 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 GMPPAQ96IJ6 420 aaPredicted RBP11.65□□□□□ -0.54
COPB1-209ENST00000533096 HS6ST2Q96MM7 605 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 FBXO34Q9NWN3 711 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 MCTS1Q9ULC4 181 aaKnown RBP11.65□□□□□ -0.54
COPB1-209ENST00000533096 MAGED1Q9Y5V3 778 aaPredicted RBP11.65□□□□□ -0.54
COPB1-209ENST00000533096 COL6A5A8TX70 2615 aa11.65□□□□□ -0.54
COPB1-209ENST00000533096 CCDC189A1A4V9 331 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 STX16-NPEPL1H3BU86 382 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 OVOL3O00110 214 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 HAX1O00165 279 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 MANBAO00462 879 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 STX16O14662 325 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 TNFSF11O14788 317 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 PCDH7O60245 1069 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 TMCC2O75069 709 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 ANGPTL1O95841 491 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 IGHV4-39P01824 125 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 SERPINB8P50452 374 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 NCBP2P52298 156 aaKnown RBP eCLIP11.64□□□□□ -0.554e-7■■■□□ 18.4
COPB1-209ENST00000533096 SRSF2Q01130 221 aaKnown RBP11.64□□□□□ -0.55
COPB1-209ENST00000533096 NAB1Q13506 487 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 GANABQ14697 944 aaKnown RBP11.64□□□□□ -0.55
COPB1-209ENST00000533096 PRSS53Q2L4Q9 553 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 GLYR1Q49A26 553 aaPredicted RBP11.64□□□□□ -0.55
COPB1-209ENST00000533096 TMEM107Q6UX40 140 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 ATG4DQ86TL0 474 aaPredicted RBP11.64□□□□□ -0.55
COPB1-209ENST00000533096 GGNQ86UU5 652 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 EXOC3L1Q86VI1 746 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 SAMD14Q8IZD0 417 aaPredicted RBP11.64□□□□□ -0.55
COPB1-209ENST00000533096 GATSQ8NAP1 163 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 STEAP2Q8NFT2 490 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 KCNK17Q96T54 332 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 NAPGQ99747 312 aaPredicted RBP11.64□□□□□ -0.55
COPB1-209ENST00000533096 RHNO1Q9BSD3 238 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 BEX2Q9BXY8 128 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 EBPLQ9BY08 206 aa11.64□□□□□ -0.55
COPB1-209ENST00000533096 ESRP2Q9H6T0 727 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms